RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 MMP28Q9H239 520 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 PIGMQ9H3S5 423 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 POFUT1Q9H488 388 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 CDH20Q9HBT6 801 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 ASF1BQ9NVP2 202 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 SLC7A11Q9UPY5 501 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 OR5H1A6NKK0 313 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 SMPD2O60906 423 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 TSC22D2O75157 780 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 CHRM2P08172 466 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 OPRM1P35372 400 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 SRP9P49458 86 aaKnown RBP8.04□□□□□ -1.12
GNE-206ENST00000543356 RBP2P50120 134 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 IDH3GP51553 393 aaPredicted RBP8.04□□□□□ -1.12
GNE-206ENST00000543356 MTCP1P56278 107 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 PRSS12P56730 875 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 RBPJQ06330 500 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 PRR30Q53SZ7 412 aaPredicted RBP8.04□□□□□ -1.12
GNE-206ENST00000543356 PLCXD3Q63HM9 321 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 BTN2A1Q7KYR7 527 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 ZNF680Q8NEM1 530 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 BORCS8Q96FH0 119 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 C1QTNF6Q9BXI9 259 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 LPAR5Q9H1C0 372 aa8.04□□□□□ -1.12
GNE-206ENST00000543356 MYEF2Q9P2K5 600 aaKnown RBP8.04□□□□□ -1.12
GNE-206ENST00000543356 FAM240BA0A1B0GVZ2 78 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 A0A1W2PR80 420 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 ANKRD20A5PA0PJZ0 165 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 H7C417 338 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 RAB27BO00194 218 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 MSTNO14793 375 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 IGLV1-44P01699 117 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 SLC6A1P30531 599 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 PRSS3P35030 304 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 BTCP35070 178 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 ATP1B3P54709 279 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 KLRB1Q12918 225 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 HLXQ14774 488 aaPredicted RBP8.03□□□□□ -1.12
GNE-206ENST00000543356 MOGAT2Q3SYC2 334 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 ZNF474Q6S9Z5 364 aaPredicted RBP8.03□□□□□ -1.12
GNE-206ENST00000543356 FBXW12Q6X9E4 464 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 ASCL4Q6XD76 172 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 MOB3CQ70IA8 216 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 OR8H3Q8N146 312 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 ACBD4Q8NC06 268 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 GPX8Q8TED1 209 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 AQP3Q92482 292 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 PIGCQ92535 297 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 WBP1Q96G27 269 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 TMEM59Q9BXS4 323 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 PCDHB16Q9NRJ7 776 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 MTFP1Q9UDX5 166 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 ELF5Q9UKW6 265 aaPredicted RBP8.03□□□□□ -1.12
GNE-206ENST00000543356 CEP295Q9C0D2 2601 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 IGKV1-27A0A075B6S5 117 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 FAM230AA0A1W2PPH8 454 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 NAP1L6A6NFF2 107 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 CRTAPO75718 401 aaPredicted RBP8.03□□□□□ -1.12
GNE-206ENST00000543356 LPLP06858 475 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 PTHLHP12272 177 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 RPS27AP62979 156 aaKnown RBP8.03□□□□□ -1.12
GNE-206ENST00000543356 PRDX4Q13162 271 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 C3orf36Q3SXR2 165 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 PLA1AQ53H76 456 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 OLFML2AQ68BL7 652 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 MTFR2Q6P444 385 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 C3P1Q6ZMU1 363 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 ZDHHC23Q8IYP9 409 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 TCTE3Q8IZS6 198 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 TMEM104Q8NE00 496 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 OR5D18Q8NGL1 313 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 OR10R2Q8NGX6 335 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 LINC00052Q96N35 136 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 S100A13Q99584 98 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 URM1Q9BTM9 101 aaKnown RBP8.03□□□□□ -1.12
GNE-206ENST00000543356 TM2D1Q9BX74 207 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 TAS2R8Q9NYW2 309 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 GPR160Q9UJ42 338 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 ING4Q9UNL4 249 aa8.03□□□□□ -1.12
GNE-206ENST00000543356 TRBV23-1A0A0A0MS06 115 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 A0A0A6YYD4 124 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 RPS10-NUDT3A0A1W2PQS6 291 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 CD300LBA8K4G0 201 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 ZNF850A8MQ14 1090 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 RBBP9O75884 186 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 SNAPINO95295 136 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 MPIG6BO95866 241 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 MELTFP08582 738 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 CSF1P09603 554 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 SFTPCP11686 197 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 PSMB1P20618 241 aaKnown RBP8.02□□□□□ -1.13
GNE-206ENST00000543356 TUBG1P23258 451 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 MEOX2P50222 304 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 PPP1CBP62140 327 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 ZNF260Q3ZCT1 412 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 DMRTC1Q5HYR2 192 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 TIMM23BQ5SRD1 257 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 PLET1Q6UQ28 207 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 C1QL2Q7Z5L3 287 aa8.02□□□□□ -1.13
GNE-206ENST00000543356 FAM89BQ8N5H3 189 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms