RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 TLCD2A6NGC4 264 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 H7C1Q1 480 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 NDUFA6P56556 154 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 KISS1Q15726 138 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 ZNF701Q9NV72 531 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-205ENST00000539661 ARID1BQ8NFD5 2236 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-205ENST00000539661 FREM2Q5SZK8 3169 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 ADAM10O14672 748 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 BCAT2O15382 392 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-205ENST00000539661 KLK3P07288 261 aaPredicted RBP15.44■□□□□ 0.06
RAB40C-205ENST00000539661 HIST1H1BP16401 226 aaKnown RBP15.44■□□□□ 0.06
RAB40C-205ENST00000539661 TMEM187Q14656 261 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 ZNF542PQ5EBM4 170 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 OR13D1Q8NGV5 346 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 OR14K1Q8NGZ2 314 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 RELTQ969Z4 430 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 NTNG2Q96CW9 530 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 ZDHHC12Q96GR4 267 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 SUCNR1Q9BXA5 334 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 NAA60Q9H7X0 242 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 ALKBH4Q9NXW9 302 aa15.44■□□□□ 0.06
RAB40C-205ENST00000539661 ELOA3CA0A087WX78 387 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-205ENST00000539661 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 RPL36A-HNRNPH2H7BZ11 118 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 C1QL1O75973 258 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 RD3LP0DJH9 198 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 PPP1CCP36873 323 aaKnown RBP15.43■□□□□ 0.06
RAB40C-205ENST00000539661 GABREP78334 506 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 PLXDC2Q6UX71 529 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 SH3BGRL3Q9H299 93 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 SIRT7Q9NRC8 400 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 ZNF319Q9P2F9 582 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 NSG1A0A0A6YYJ2 146 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-205ENST00000539661 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-205ENST00000539661 RBFOX3A6NFN3 312 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 B4DGG1 531 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 ZNF43P17038 809 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 ZNF133P52736 654 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-205ENST00000539661 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.43■□□□□ 0.06
RAB40C-205ENST00000539661 CLEC9AQ6UXN8 241 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 OR1N1Q8NGS0 311 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 FAM213BQ8TBF2 198 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 GTF3AQ92664 365 aaKnown RBP15.43■□□□□ 0.06
RAB40C-205ENST00000539661 SGK3Q96BR1 496 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 EMC6Q9BV81 110 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 CHRNA10Q9GZZ6 450 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 SERINC1Q9NRX5 453 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 SOHLH2Q9NX45 425 aa15.43■□□□□ 0.06
RAB40C-205ENST00000539661 IGKV1D-8A0A087WSZ0 117 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 DHRS7CA6NNS2 312 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 DUSP1P28562 367 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 SUMO3P55854 103 aaPredicted RBP15.42■□□□□ 0.06
RAB40C-205ENST00000539661 PIGPP57054 158 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 APCDD1LQ8NCL9 501 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 PRDM13Q9H4Q3 707 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 ANXA10Q9UJ72 324 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 SPTY2D1-AS1A0A0U1RR47 76 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 LIPT2A6NK58 231 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 ST8SIA3O43173 380 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 SERPINA2P20848 420 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 OR1D4P47884 311 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 RBP2P50120 134 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 CRIP3Q6Q6R5 217 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 C1QL2Q7Z5L3 287 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 HSD17B11Q8NBQ5 300 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 SLC38A9Q8NBW4 561 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 C18orf12Q96KH6 178 aa15.42■□□□□ 0.06
RAB40C-205ENST00000539661 H3BQ15 152 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 IFNA10P01566 189 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 ATXN8OSP0DMR3 200 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 CLRN1P58418 232 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 GRB2P62993 217 aaKnown RBP15.41■□□□□ 0.06
RAB40C-205ENST00000539661 HYAL1Q12794 435 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 C1orf61Q13536 156 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 ELOBQ15370 118 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 ZNF674Q2M3X9 581 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 Q3ZCU0 254 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 TMEM182Q6ZP80 229 aaPredicted RBP15.41■□□□□ 0.06
RAB40C-205ENST00000539661 NOXO1Q8NFA2 376 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 RAB39BQ96DA2 213 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 MVB12AQ96EY5 273 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 NELFAQ9H3P2 528 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 MCTS1Q9ULC4 181 aaKnown RBP15.41■□□□□ 0.06
RAB40C-205ENST00000539661 TDRD6O60522 2096 aaKnown RBP15.41■□□□□ 0.06
RAB40C-205ENST00000539661 OR5H8P0DN80 308 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 FZD2Q14332 565 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 KCNMB1Q16558 191 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 C14orf144Q96I85 54 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 PNRC2Q9NPJ4 139 aaKnown RBP15.41■□□□□ 0.06
RAB40C-205ENST00000539661 KIAA1456Q9P272 454 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 ZDHHC8Q9ULC8 765 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 TRIOBPQ9H2D6 2365 aa15.41■□□□□ 0.06
RAB40C-205ENST00000539661 ZNF587BE7ETH6 402 aa15.4■□□□□ 0.06
RAB40C-205ENST00000539661 STMND1H3BQB6 276 aa15.4■□□□□ 0.06
RAB40C-205ENST00000539661 GPR37O15354 613 aa15.4■□□□□ 0.06
RAB40C-205ENST00000539661 RAMP1O60894 148 aa15.4■□□□□ 0.06
RAB40C-205ENST00000539661 IGHG1P01857 330 aa15.4■□□□□ 0.06
RAB40C-205ENST00000539661 TAGLN2P37802 199 aaKnown RBP15.4■□□□□ 0.06
RAB40C-205ENST00000539661 ZNF266Q14584 549 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms