RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 RNLSQ5VYX0 342 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 STUMQ69YW2 141 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 FAHD2BQ6P2I3 314 aaPredicted RBP18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 CALHM1Q8IU99 346 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 POC1AQ8NBT0 407 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 DNAAF1Q8NEP3 725 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 OR4M2Q8NGB6 313 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 FAHD2AQ96GK7 314 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 TMPRSS13Q9BYE2 586 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 SCN3BQ9NY72 215 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 KAAG1Q9UBP8 84 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 RAB26Q9ULW5 256 aa18.92■□□□□ 0.62
SFSWAP-204ENST00000535399 NOS1APO75052 506 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 FCN3O75636 299 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 PGA5P0DJD9 388 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 HNF1AP20823 631 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 GLRA1P23415 457 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 GATA3P23771 443 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 SLC35A2P78381 396 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 ATPAF1Q5TC12 328 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 DMKNQ6E0U4 476 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 C1orf229Q6ZS94 237 aaPredicted RBP18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 NANOGP1Q8N7R0 232 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 MYDGFQ969H8 173 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 SMIM19Q96E16 107 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 ZNF488Q96MN9 340 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 PKIBQ9C010 78 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 SNTG1Q9NSN8 517 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 DNAJB11Q9UBS4 358 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 CLN8Q9UBY8 286 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 POLDIP2Q9Y2S7 368 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 PCDHGB5Q9Y5G0 923 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 ARHGAP32A7KAX9 2087 aa18.91■□□□□ 0.62
SFSWAP-204ENST00000535399 A0A1B0GW55 424 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 J3QLI3 93 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 MYL12BO14950 172 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 AVPP01185 164 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 MT-ND2P03891 347 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUX4L2P0CJ85 424 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUX4L3P0CJ86 424 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUX4L4P0CJ87 422 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUX4L5P0CJ88 424 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUX4L6P0CJ89 424 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUX4L7P0CJ90 424 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 PRKACBP22694 351 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 WNT4P56705 351 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUX4L9Q6RFH8 374 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 PARP16Q8N5Y8 322 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 ZFP41Q8N8Y5 198 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 OR5T2Q8NGG2 359 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 GPR148Q8TDV2 347 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DACT3Q96B18 629 aaPredicted RBP18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 BORCS8Q96FH0 119 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 CNBD2Q96M20 576 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 CCL13Q99616 98 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 NRIP2Q9BQI9 281 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 CDCA4Q9BXL8 241 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUSP21Q9H596 190 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 SMURF1Q9HCE7 757 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 NLKQ9UBE8 527 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DUX4Q9UBX2 424 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 OR5V1Q9UGF6 321 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 DHDHQ9UQ10 334 aa18.9■□□□□ 0.62
SFSWAP-204ENST00000535399 TMPRSS2O15393 492 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 ACAA1P09110 424 aaPredicted RBP18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 FAM157CP0CG43 387 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 AZGP1P25311 298 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 NPY4RP50391 375 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 IL24Q13007 206 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 OR13C9Q8NGT0 318 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 ANGPTL6Q8NI99 470 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 TSEN15Q8WW01 171 aaKnown RBP18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 GHSRQ92847 366 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 SPSB1Q96BD6 273 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 TMIGD2Q96BF3 282 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 PGLYRP3Q96LB9 341 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 RASSF4Q9H2L5 321 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 ZCCHC4Q9H5U6 513 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 RASL12Q9NYN1 266 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 OPN4Q9UHM6 478 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 ERGIC3Q9Y282 383 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 ZNF281Q9Y2X9 895 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 TPRKBQ9Y3C4 175 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 INSIG2Q9Y5U4 225 aa18.89■□□□□ 0.61
SFSWAP-204ENST00000535399 WNK2Q9Y3S1 2297 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 TFF1P04155 84 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 CRHBPP24387 322 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 SOX2P48431 317 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 RBP2P50120 134 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 TAS2R43P59537 309 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 ERVK11-1P61568 191 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 IRF3Q14653 427 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 ACP7Q6ZNF0 438 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 SERPINA12Q8IW75 414 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 FAM216BQ8N7L0 139 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 ZNF184Q99676 751 aaPredicted RBP18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 DNTTIP1Q9H147 329 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 HES4Q9HCC6 221 aa18.88■□□□□ 0.61
SFSWAP-204ENST00000535399 LOC105371242A0A075B767 164 aa18.87■□□□□ 0.61
SFSWAP-204ENST00000535399 IGHV2-70DA0A0C4DH43 119 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms