RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 IGHV3-49A0A0A0MS15 119 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 M0QX08 132 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 MYL12BO14950 172 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 PRLHRP49683 370 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 KRTAP12-4P60329 112 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 LINC00303Q3SY05 128 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 FBXL19-AS1Q494R0 122 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 CDNFQ49AH0 187 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 YIF1BQ5BJH7 314 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 ACTL10Q5JWF8 245 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 COPS6Q7L5N1 327 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 ERO1BQ86YB8 467 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 ZNF101Q8IZC7 436 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 TRIML2Q8N7C3 387 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 SLC35G3Q8N808 338 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 APCDD1LQ8NCL9 501 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 OR5T1Q8NG75 326 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 OR6K2Q8NGY2 324 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 SFXN5Q8TD22 340 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 CDKL2Q92772 493 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 ALS2CR12Q96Q35 445 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 ZNF649Q9BS31 505 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 NUDT9Q9BW91 350 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 COA1Q9GZY4 146 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 PORCNQ9H237 461 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 PRORYQ9H606 182 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 TMEM100Q9NV29 134 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 CLEC2DQ9UHP7 191 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 SLC7A11Q9UPY5 501 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 SIGLEC1Q9BZZ2 1709 aa2.3□□□□□ -2.04
PRKDC-205ENST00000535375 BRCA1P38398 1863 aaKnown RBP2.3□□□□□ -2.04
PRKDC-205ENST00000535375 TRAV8-6A0A0B4J262 113 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 FAM240AA0A1B0GVK7 77 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 K7ERQ8 282 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 YKT6O15498 198 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 GATBO75879 557 aaKnown RBP2.29□□□□□ -2.04
PRKDC-205ENST00000535375 CD8AP01732 235 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 LIPCP11150 499 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 NELFEP18615 380 aaKnown RBP2.29□□□□□ -2.04
PRKDC-205ENST00000535375 IL3RAP26951 378 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 PSMB5P28074 263 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 ARR3P36575 388 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 RGS6P49758 472 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 IL15RAQ13261 267 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 FAM222AQ5U5X8 452 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 SPINT4Q6UDR6 99 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 Q6ZSR6 202 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 SLC25A29Q8N8R3 303 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 CYB561A3Q8NBI2 242 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 OR2M7Q8NG81 312 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 NT5CQ8TCD5 201 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 CPNE4Q96A23 557 aaPredicted RBP2.29□□□□□ -2.04
PRKDC-205ENST00000535375 MRPL48Q96GC5 212 aaKnown RBP2.29□□□□□ -2.04
PRKDC-205ENST00000535375 SNF8Q96H20 258 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 CDX2Q99626 313 aaPredicted RBP2.29□□□□□ -2.04
PRKDC-205ENST00000535375 PRRG3Q9BZD7 231 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 C6orf50Q9HD87 102 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 VCX3AQ9NNX9 186 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 ZNF391Q9UJN7 358 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 FARSAQ9Y285 508 aaKnown RBP2.29□□□□□ -2.04
PRKDC-205ENST00000535375 AP3M1Q9Y2T2 418 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 CBY1Q9Y3M2 126 aa2.29□□□□□ -2.04
PRKDC-205ENST00000535375 IGHV1-3A0A0C4DH29 117 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 ZNF98A6NK75 572 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 UPK1AO00322 258 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 CST4P01036 141 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 COL8A2P25067 703 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 PRSS3P35030 304 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 DEKP35659 375 aaKnown RBP2.28□□□□□ -2.04
PRKDC-205ENST00000535375 DNASE1L1P49184 302 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 ELF3P78545 371 aaPredicted RBP2.28□□□□□ -2.04
PRKDC-205ENST00000535375 C2orf80Q0P641 193 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 BAMBIQ13145 260 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 TTC32Q5I0X7 151 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 HHATQ5VTY9 493 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 GAPTQ8N292 157 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 LINC00337Q8N6G1 96 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 TVP23CQ96ET8 276 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 Q96MT0 163 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 SPACA5Q96QH8 159 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 PDCD1LG2Q9BQ51 273 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 LHX5Q9H2C1 402 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 ZSCAN16Q9H4T2 348 aaPredicted RBP2.28□□□□□ -2.04
PRKDC-205ENST00000535375 C21orf62Q9NYP8 219 aa2.28□□□□□ -2.04
PRKDC-205ENST00000535375 ZNF230Q9UIE0 474 aaPredicted RBP2.28□□□□□ -2.04
PRKDC-205ENST00000535375 NID2Q14112 1375 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 SLC5A10A0PJK1 596 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 RAB19A4D1S5 217 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 VGLL3A8MV65 326 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 C16orf90A8MZG2 172 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 NDUFS5O43920 106 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 CYB5R3P00387 301 aaPredicted RBP2.27□□□□□ -2.05
PRKDC-205ENST00000535375 P0C880 135 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 HSPD1P10809 573 aaKnown RBP2.27□□□□□ -2.05
PRKDC-205ENST00000535375 PRKACBP22694 351 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 GDI2P50395 445 aaKnown RBP2.27□□□□□ -2.05
PRKDC-205ENST00000535375 CMC4P56277 68 aaPredicted RBP2.27□□□□□ -2.05
PRKDC-205ENST00000535375 OR12D2P58182 307 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 TNNC1P63316 161 aa2.27□□□□□ -2.05
PRKDC-205ENST00000535375 PRKCDQ05655 676 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms