RNA–Protein interactions for RNA: ENST00000531727.5

CPSF1-207, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3 BASIC

Gene CPSF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-207ENST00000531727 MNTQ99583 582 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 C19orf12Q9NSK7 152 aa13.73□□□□□ -0.21
CPSF1-207ENST00000531727 SF3B6Q9Y3B4 125 aaKnown RBP13.73□□□□□ -0.21
CPSF1-207ENST00000531727 VWFP04275 2813 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 ANKRD61A6NGH8 418 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 SLC22A31A6NKX4 558 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 RFPL4AA6NLU0 287 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 RFPL4AL1F8VTS6 287 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 H3BUX3 64 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 J3QT63 122 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 M0R129 80 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 DLGAP1O14490 977 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 ANGPTL7O43827 346 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 PGA5P0DJD9 388 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 HAAOP46952 286 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 CXCR4P61073 352 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 ACTR3P61158 418 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 EFNB1P98172 346 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 BCL2L15Q5TBC7 163 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 AADACL4Q5VUY2 407 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 NXNL2Q5VZ03 156 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 ZNF573Q86YE8 665 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 SLC35F2Q8IXU6 374 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 MKXQ8IYA7 352 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 ZNF561Q8N587 486 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 TCEANCQ8N8B7 351 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 APOL4Q9BPW4 351 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 PPA2Q9H2U2 334 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 ADGRL4Q9HBW9 690 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 KRT84Q9NSB2 600 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 H2AFY2Q9P0M6 372 aaPredicted RBP13.72□□□□□ -0.21
CPSF1-207ENST00000531727 OR52A1Q9UKL2 312 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 GTF2A1LQ9UNN4 478 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 POLDIP2Q9Y2S7 368 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 R4GMQ9 66 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 V9GYS6 101 aa13.72□□□□□ -0.21
CPSF1-207ENST00000531727 A0A1B0GTI1 187 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 A0A1W2PPH5 198 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 PQLC2LA1A4F0 135 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 ZNF670-ZNF695F2Z2N8 137 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 SLC1A7O00341 560 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 MAGEB4O15481 346 aaPredicted RBP13.71□□□□□ -0.21
CPSF1-207ENST00000531727 SYNGR1O43759 233 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 NOS1APO75052 506 aaPredicted RBP13.71□□□□□ -0.21
CPSF1-207ENST00000531727 PRDX2P32119 198 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 RPL31P62899 125 aaKnown RBP13.71□□□□□ -0.21
CPSF1-207ENST00000531727 EGR3Q06889 387 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 SLX4IPQ5VYV7 408 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 SLC35E4Q6ICL7 350 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 Q6ZSR3 168 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 ELMOD2Q8IZ81 293 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 OR51G2Q8NGK0 314 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 OR14K1Q8NGZ2 314 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 TMEM163Q8TC26 289 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 C17orf50Q8WW18 174 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 AJUBAQ96IF1 538 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 SSX3Q99909 188 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 FAM234AQ9H0X4 552 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 GPR173Q9NS66 373 aa13.71□□□□□ -0.21
CPSF1-207ENST00000531727 DHRS7CA6NNS2 312 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 ZAR1LA6NP61 321 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 MITFO75030 526 aaPredicted RBP13.7□□□□□ -0.22
CPSF1-207ENST00000531727 NXPH2O95156 264 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 TSPAN15O95858 294 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 MPZP25189 248 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 CEBPDP49716 269 aaPredicted RBP13.7□□□□□ -0.22
CPSF1-207ENST00000531727 C12orf73Q69YU5 71 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 TMEM200BQ69YZ2 307 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 ASRGL1Q7L266 308 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 GID4Q8IVV7 300 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 BCAS4Q8TDM0 211 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 RORBQ92753 470 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 NRIP2Q9BQI9 281 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 MEGF9Q9H1U4 602 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 CLN6Q9NWW5 311 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 FBLN5Q9UBX5 448 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 MRM2Q9UI43 246 aaKnown RBP13.7□□□□□ -0.22
CPSF1-207ENST00000531727 SNX5Q9Y5X3 404 aa13.7□□□□□ -0.22
CPSF1-207ENST00000531727 G3V2T6 193 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 EPHA2P29317 976 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 ATP6AP1Q15904 470 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 AANATQ16613 207 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 LRRC75BQ2VPJ9 315 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 PLEKHG7Q6ZR37 379 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 C11orf42Q8N5U0 333 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 OR4M1Q8NGD0 313 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 CADM1Q9BY67 442 aaKnown RBP13.69□□□□□ -0.22
CPSF1-207ENST00000531727 HEXA-AS1Q9H8Q6 139 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 HES4Q9HCC6 221 aa13.69□□□□□ -0.22
CPSF1-207ENST00000531727 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.69□□□□□ -0.22
CPSF1-207ENST00000531727 hCG_1809904A0A1W2PP81 198 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 A0A1W2PPE2 198 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 A0A1W2PR64 198 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 A0A1W2PRV1 198 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 A6NIN4 97 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 TK1P04183 234 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 CCL1P22362 96 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 GABRA5P31644 462 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 C2orf68Q2NKX9 166 aa13.68□□□□□ -0.22
CPSF1-207ENST00000531727 KDM4DQ6B0I6 523 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 148.2 ms