RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 ELMOD3Q96FG2 381 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 TAAR6Q96RI8 345 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 CMSS1Q9BQ75 279 aaKnown RBP10.18□□□□□ -0.78
PTPRK-216ENST00000524481 UFSP2Q9NUQ7 469 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 A0A0U1RQV5 110 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 LINC01387J3KSC0 135 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 SLC33A1O00400 549 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-216ENST00000524481 CRYGSP22914 178 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 AGTR1P30556 359 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 CNN3Q15417 329 aaKnown RBP10.18□□□□□ -0.78
PTPRK-216ENST00000524481 CLVS2Q5SYC1 327 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 RIPPLY2Q5TAB7 128 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 HYLS1Q96M11 299 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 SCNM1Q9BWG6 230 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 CDH20Q9HBT6 801 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 KIAA1549Q9HCM3 1950 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 OR2AT4A6NND4 320 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 TMEM14DPA8MWL7 114 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 C1QBP02746 253 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 SEC61A1P61619 476 aaKnown RBP10.18□□□□□ -0.78
PTPRK-216ENST00000524481 PRDX4Q13162 271 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 CD276Q5ZPR3 534 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 SLC30A7Q8NEW0 376 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 GPHA2Q96T91 129 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 OR2J1Q9GZK6 312 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 OPN3Q9H1Y3 402 aaPredicted RBP10.18□□□□□ -0.78
PTPRK-216ENST00000524481 B3GNT2Q9NY97 397 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 KCNN3Q9UGI6 736 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 SLC23A1Q9UHI7 598 aa10.18□□□□□ -0.78
PTPRK-216ENST00000524481 A6NLC8 198 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 F8VVB4 439 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 F8VWA3 439 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 SSX5O60225 188 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 CHRM2P08172 466 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 GLRA1P23415 457 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 CPT2P23786 658 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 HTR2BP41595 481 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 TGFBR3Q03167 851 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 GLRX5Q86SX6 157 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 CDH24Q86UP0 819 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 CISD2Q8N5K1 135 aaKnown RBP10.17□□□□□ -0.78
PTPRK-216ENST00000524481 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-216ENST00000524481 ST8SIA4Q92187 359 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 HS3ST6Q96QI5 342 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 DLL4Q9NR61 685 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 ZNF224Q9NZL3 707 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 POM121CA8CG34 1229 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 ZNF891A8MT65 544 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-216ENST00000524481 BET1O15155 118 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 IL18BPO95998 194 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 PDGFAP04085 211 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 HOXB5P09067 269 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 MMP7P09237 267 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-216ENST00000524481 CD34P28906 385 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 ATPAF1Q5TC12 328 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-216ENST00000524481 MYPOPQ86VE0 399 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-216ENST00000524481 C12orf45Q8N5I9 185 aaPredicted RBP10.17□□□□□ -0.78
PTPRK-216ENST00000524481 OR10AD1Q8NGE0 317 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 OR14J1Q9UGF5 321 aa10.17□□□□□ -0.78
PTPRK-216ENST00000524481 IGKV1D-8A0A087WSZ0 117 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 ZNF816-ZNF321PA0A0X1KG74 233 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 C7orf66A4D0T2 115 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 LDLRAD4O15165 306 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 BMP5P22003 454 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 IKZF1Q13422 519 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 PPP1R1AQ13522 171 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 RFPL4BQ6ZWI9 263 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 C9orf106Q8NAJ2 232 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 STEAP2Q8NFT2 490 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 CCDC107Q8WV48 283 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 AQP3Q92482 292 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 METTL8Q9H825 291 aaKnown RBP10.16□□□□□ -0.78
PTPRK-216ENST00000524481 VSIG4Q9Y279 399 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 IGKV1-12A0A0C4DH73 117 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 TEX13DA0A0J9YY54 714 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-216ENST00000524481 LOC390937A0A1W2PQ73 354 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 IGKV1D-12P01611 117 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 PTGER4P35408 488 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 RPS27AP62979 156 aaKnown RBP10.16□□□□□ -0.78
PTPRK-216ENST00000524481 SNTB1Q13884 538 aaKnown RBP10.16□□□□□ -0.78
PTPRK-216ENST00000524481 SP6Q3SY56 376 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 ZNF610Q8N9Z0 462 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 TMEM229BQ8NBD8 167 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 OR13C8Q8NGS7 320 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 IL1F10Q8WWZ1 152 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 PECRQ9BY49 303 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 CLEC4MQ9H2X3 399 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-216ENST00000524481 OBP2BQ9NPH6 170 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 hCG_1807616A0A1W2PRN6 198 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 ANKRD30BLA7E2S9 258 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 CD300LBA8K4G0 201 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 L7N2F9 121 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 SYNGR1O43759 233 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 RGS11O94810 467 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 ZNF44P15621 663 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 PRKACBP22694 351 aa10.16□□□□□ -0.78
PTPRK-216ENST00000524481 NFYAP23511 347 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-216ENST00000524481 HOXD11P31277 338 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-216ENST00000524481 OTX1P32242 354 aaPredicted RBP10.16□□□□□ -0.78
PTPRK-216ENST00000524481 H2BFSP57053 126 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms