RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MARCH9Q86YJ5 346 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 AQP12AQ8IXF9 295 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 C20orf196Q8IYI0 205 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 PGBD5Q8N414 524 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 FTMTQ8N4E7 242 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SPICQ8N5J4 248 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 LRRC75AQ8NAA5 344 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 OR4F6Q8NGB9 312 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 OR51Q1Q8NH59 317 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 ST6GALNAC6Q969X2 333 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 MOB3AQ96BX8 217 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SCARF2Q96GP6 870 aaPredicted RBP6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SLC35G5Q96KT7 338 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SIGLEC12Q96PQ1 595 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SMG1Q96Q15 3661 aaKnown RBP6.63□□□□□ -1.35
HDAC3-216ENST00000523088 TAF9BQ9HBM6 251 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SLC6A20Q9NP91 592 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 DLL4Q9NR61 685 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 TAAR2Q9P1P5 351 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 SS18L2Q9UHA2 77 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 PACSIN3Q9UKS6 424 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 FAM96BQ9Y3D0 163 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 CFAP20Q9Y6A4 193 aaKnown RBP6.63□□□□□ -1.35
HDAC3-216ENST00000523088 BAHCC1Q9P281 2608 aa6.63□□□□□ -1.35
HDAC3-216ENST00000523088 KIR2DS5A0A0G2JLQ3 304 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 A0A0G2JNG1 304 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 A0A0J9YY10 115 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 A0A1B0GX78 115 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 SLC22A20A6NK97 555 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 MCRIP1C9JLW8 97 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF878C9JN71 531 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 TNFRSF11BO00300 401 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 SOCS2O14508 198 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 DSCR3O14972 297 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 YIF1AO95070 293 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 FARS2O95363 451 aaKnown RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 HAND1O96004 215 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 B3GALT4O96024 378 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 HLA-AP01891 365 aaKnown RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 HBZP02008 142 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ESR1P03372 595 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 PRKCGP05129 697 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 HLA-DQB2P05538 268 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 WNT2P09544 360 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 GIPP09681 153 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 LIPCP11150 499 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 IGFBP2P18065 325 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 PMCHP20382 165 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 USF1P22415 310 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 NFYAP23511 347 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 TNFSF8P32971 234 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 RPA3P35244 121 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 TGFBR1P36897 503 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 GABRA2P47869 451 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 OR3A4PP47883 348 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ASCL1P50553 236 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 PDX1P52945 283 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 CLDN6P56747 220 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 TAS2R30P59541 319 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ID2Q02363 134 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 KIR2DS5Q14953 304 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 SMN1Q16637 294 aaKnown RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF766Q5HY98 468 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 C1QL3Q5VWW1 255 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 TXNRD3NBQ6F5E7 133 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ASPHD2Q6ICH7 369 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 PODNL1Q6PEZ8 512 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 GDPGP1Q6ZNW5 385 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 Q6ZVL8 140 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 DOK3Q7L591 496 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 HSD11B1LQ7Z5J1 315 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 PHYKPLQ8IUZ5 450 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 GBGT1Q8N5D6 347 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 TCTEX1D1Q8N7M0 179 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 SLC35G3Q8N808 338 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 OR5AN1Q8NGI8 311 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 OR13G1Q8NGZ3 307 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 OR10G6Q8NH81 332 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 OR5K2Q8NHB8 316 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 FBLIM1Q8WUP2 373 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 C15orf40Q8WUR7 153 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 PIGCQ92535 297 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 C8orf44Q96CB5 159 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 SLC35A4Q96G79 324 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 COX14Q96I36 57 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 FAM46AQ96IP4 442 aaKnown RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF582Q96NG8 517 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ARHGAP9Q9BRR9 750 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 NUDT9Q9BW91 350 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 TMEM126AQ9H061 195 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 DUSP21Q9H596 190 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 SEC61A2Q9H9S3 476 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 CBLN4Q9NTU7 201 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 MRPL16Q9NX20 251 aaKnown RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 FRRS1LQ9P0K9 344 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 VAX2Q9UIW0 290 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 POLR3KQ9Y2Y1 108 aaPredicted RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 V9GYH0 126 aa6.62□□□□□ -1.35
HDAC3-216ENST00000523088 ZNF106Q9H2Y7 1883 aaKnown RBP6.62□□□□□ -1.35
HDAC3-216ENST00000523088 TRAV38-1A0A0B4J264 116 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms