RNA–Protein interactions for RNA: ENST00000508466.1

LIMCH1-207, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2

Gene LIMCH1, Length 3,051 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-207ENST00000508466 CRTAPO75718 401 aaPredicted RBP6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 CTSBP07858 339 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 DEFA4P12838 97 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 EPHA1P21709 976 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 FCARP24071 287 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 COL8A2P25067 703 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 ATP6V0CP27449 155 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 WASP42768 502 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 RAB1AP62820 205 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 POLR2LP62875 67 aaKnown RBP6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 MRPS34P82930 218 aaKnown RBP6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 FMODQ06828 376 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 RUNX2Q13950 521 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 CCL15Q16663 113 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 IZUMO4Q1ZYL8 232 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 SLC22A25Q6T423 547 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 AMZ2Q86W34 360 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 HOGA1Q86XE5 327 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 LRRC25Q8N386 305 aaPredicted RBP6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 TRAM1L1Q8N609 369 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF709Q8N972 641 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 OR2A1Q8NGT9 310 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 OR5H2Q8NGV7 314 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 ANKRD9Q96BM1 317 aaPredicted RBP6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 ZNF665Q9H7R5 613 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 PATZ1Q9HBE1 687 aaKnown RBP6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 MKKSQ9NPJ1 570 aaPredicted RBP6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 MARCH5Q9NX47 278 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 NLRC5Q86WI3 1866 aa6.4□□□□□ -1.38
LIMCH1-207ENST00000508466 CDC14CA4D256 554 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 SHISA7A6NL88 538 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 FGF17O60258 216 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 RPLP2P05387 115 aaKnown RBP6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 PVRP15151 417 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF20P17024 532 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 CHRNA7P36544 502 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 SNU13P55769 128 aaKnown RBP6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 HLA-DRB3P79483 266 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 DUSP8Q13202 625 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 ICAM4Q14773 271 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 OGFOD3Q6PK18 319 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 TMEM108Q6UXF1 575 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 PARS2Q7L3T8 475 aaKnown RBP6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 SAXO1Q8IYX7 474 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 PRR22Q8IZ63 422 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 EXD3Q8N9H8 876 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 BEND2Q8NDZ0 799 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 OR10S1Q8NGN2 331 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 R3HDM4Q96D70 268 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 WDR34Q96EX3 536 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 MS4A10Q96PG2 267 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 LYSMD1Q96S90 227 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 GPER1Q99527 375 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 OR8D2Q9GZM6 311 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 VSIRQ9H7M9 311 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 CALHM2Q9HA72 323 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 SERTAD3Q9UJW9 196 aa6.4□□□□□ -1.39
LIMCH1-207ENST00000508466 LOC107986453A0A1B0GWG9 222 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 TCRBV21S2A2A0A5A6 115 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 TLCD2A6NGC4 264 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 TMEM212A6NML5 194 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 RPL36A-HNRNPH2H7BZ11 118 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 J3QW42 95 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 DVL1O14640 695 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 NUDT14O95848 222 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 DDAH2O95865 285 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 TK1P04183 234 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 HLA-GP17693 338 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 S1PR1P21453 382 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 IL12BP29460 328 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 OR3A4PP47883 348 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ACKR1Q16570 336 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 SPSB3Q6PJ21 355 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNF765Q7L2R6 523 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 PEG10Q86TG7 708 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 CADM4Q8NFZ8 388 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 OR10G6Q8NH81 332 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 TAAR8Q969N4 342 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ADAT3Q96EY9 351 aaPredicted RBP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 IMMP2LQ96T52 175 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ATP5SQ99766 215 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ZPBPQ9BS86 351 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 PLEKHA2Q9HB19 425 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 LINC01553A4QN01 128 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 AQP7P3A6NL99 342 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ZNHIT1O43257 154 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 HCRTR2O43614 444 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 SPINK4O60575 86 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 FOLR1P15328 257 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 GALNSP34059 522 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 GRK6P43250 576 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 RPL18Q07020 188 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ENDOGQ14249 297 aaKnown RBP6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 ARHGAP11BQ3KRB8 267 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 GLIPR1L1Q6UWM5 242 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 OR10A7Q8NGE5 316 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 OR52R1Q8NGF1 315 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 OR2L8Q8NGY9 312 aa6.39□□□□□ -1.39
LIMCH1-207ENST00000508466 AQP3Q92482 292 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms