RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 HIF1ANQ9NWT6 349 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 KAAG1Q9UBP8 84 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 OR5V1Q9UGF6 321 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 POLR3KQ9Y2Y1 108 aaPredicted RBP12.54□□□□□ -0.4
RNF4-210ENST00000508235 SIRT4Q9Y6E7 314 aaPredicted RBP12.54□□□□□ -0.4
RNF4-210ENST00000508235 MALRD1Q5VYJ5 2156 aa12.54□□□□□ -0.4
RNF4-210ENST00000508235 A0A0G2JMP0 313 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 A0A0X1KG70 313 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 INAFM1C9JVW0 142 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 MAGEB3O15480 346 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 SULT1B1O43704 296 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 NOS1APO75052 506 aaPredicted RBP12.53□□□□□ -0.4
RNF4-210ENST00000508235 CYB5AP00167 134 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 LALBAP00709 142 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 ACAA1P09110 424 aaPredicted RBP12.53□□□□□ -0.4
RNF4-210ENST00000508235 CELP19835 753 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 MPZP25189 248 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 PITPNBP48739 271 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 MTCP1P56278 107 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 IRF3Q14653 427 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 MED22Q15528 200 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 SMIM21Q3B7S5 101 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 SLC36A1Q7Z2H8 476 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 TEX29Q8N6K0 151 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 OR4M2Q8NGB6 313 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 OPALINQ96PE5 141 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 YTHDF1Q9BYJ9 559 aaKnown RBP12.53□□□□□ -0.4
RNF4-210ENST00000508235 DNTTIP1Q9H147 329 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 NLKQ9UBE8 527 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 CLN8Q9UBY8 286 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 CDC42EP3Q9UKI2 254 aa12.53□□□□□ -0.4
RNF4-210ENST00000508235 IGHV3OR15-7A0A075B7D8 119 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 IGKV1-9A0A0C4DH69 117 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 NKX6-3A6NJ46 265 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.52□□□□□ -0.41
RNF4-210ENST00000508235 J3QLI3 93 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 TNFRSF13BO14836 293 aaPredicted RBP12.52□□□□□ -0.41
RNF4-210ENST00000508235 ADAM20O43506 726 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 MRPS14O60783 128 aaKnown RBP12.52□□□□□ -0.41
RNF4-210ENST00000508235 GYPAP02724 150 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 RAB3AP20336 220 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 SOX2P48431 317 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 GABARAPL2P60520 117 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 PPP3R1P63098 170 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 LCN2P80188 198 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 GPR50Q13585 617 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 C11orf91Q3C1V1 193 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 Q499Y3 187 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 DCAF12L2Q5VW00 463 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 ANGPTL5Q86XS5 388 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 MKXQ8IYA7 352 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 ZFP41Q8N8Y5 198 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 OR13C9Q8NGT0 318 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 RGP1Q92546 391 aaPredicted RBP12.52□□□□□ -0.41
RNF4-210ENST00000508235 TMEM106AQ96A25 262 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 MED30Q96HR3 178 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 PGLYRP3Q96LB9 341 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 SHARPINQ9H0F6 387 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 CKLFQ9UBR5 152 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 CSPG4Q6UVK1 2322 aa12.52□□□□□ -0.41
RNF4-210ENST00000508235 ABCA2Q9BZC7 2435 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 TRBV5-5A0A0J9YX44 114 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 OR2AT4A6NND4 320 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 TMPRSS2O15393 492 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 SYNGR1O43759 233 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 NXPH2O95156 264 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 HCKP08631 526 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 PGA5P0DJD9 388 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 MAPK3P27361 379 aaPredicted RBP12.51□□□□□ -0.41
RNF4-210ENST00000508235 GMFBP60983 142 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 SEC61A1P61619 476 aaKnown RBP12.51□□□□□ -0.41
RNF4-210ENST00000508235 HOXA4Q00056 320 aaPredicted RBP12.51□□□□□ -0.41
RNF4-210ENST00000508235 CR1LQ2VPA4 569 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 CHRFAM7AQ494W8 412 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 ATPAF1Q5TC12 328 aaPredicted RBP12.51□□□□□ -0.41
RNF4-210ENST00000508235 CD276Q5ZPR3 534 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 STUMQ69YW2 141 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 LYPD2Q6UXB3 125 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 ACP7Q6ZNF0 438 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 SLC25A26Q70HW3 274 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 CALHM1Q8IU99 346 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 Q8IYB0 196 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 MS4A15Q8N5U1 240 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 SGCDQ92629 289 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 CEP19Q96LK0 163 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 NRIP2Q9BQI9 281 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 WDR13Q9H1Z4 485 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 ISYNA1Q9NPH2 558 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 LSM2Q9Y333 95 aaKnown RBP12.51□□□□□ -0.41
RNF4-210ENST00000508235 HIVEP2P31629 2446 aa12.51□□□□□ -0.41
RNF4-210ENST00000508235 IGKV1-27A0A075B6S5 117 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 PNMA8CA0A1B0GUJ8 204 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 PHF1O43189 567 aaPredicted RBP12.5□□□□□ -0.41
RNF4-210ENST00000508235 NDUFB3O43676 98 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 CRLF1O75462 422 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 RIPPLY3P57055 190 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 TBCEQ15813 527 aaPredicted RBP12.5□□□□□ -0.41
RNF4-210ENST00000508235 FAM120AOSQ5T036 256 aa12.5□□□□□ -0.41
RNF4-210ENST00000508235 WDR25Q64LD2 544 aaPredicted RBP12.5□□□□□ -0.41
RNF4-210ENST00000508235 FAHD2BQ6P2I3 314 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms