RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 VCX3AQ9NNX9 186 aa3.48□□□□□ -1.85
HMGB1P3-201ENST00000502802 ZDHHC4Q9NPG8 344 aa3.48□□□□□ -1.85
HMGB1P3-201ENST00000502802 ANAPC11Q9NYG5 84 aa3.48□□□□□ -1.85
HMGB1P3-201ENST00000502802 ZNF229Q9UJW7 825 aa3.48□□□□□ -1.85
HMGB1P3-201ENST00000502802 ZNF257Q9Y2Q1 563 aa3.48□□□□□ -1.85
HMGB1P3-201ENST00000502802 WSB1Q9Y6I7 421 aa3.48□□□□□ -1.85
HMGB1P3-201ENST00000502802 TDRD6O60522 2096 aaKnown RBP3.48□□□□□ -1.85
HMGB1P3-201ENST00000502802 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 A0A096LNJ9 63 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 SMIM26A0A096LP01 95 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 TMX2-CTNND1H3BSU7 103 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 PRMT5O14744 637 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 RRP8O43159 456 aaKnown RBP3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 RAD1O60671 282 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 CTNSO60931 367 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 PTHP01270 115 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 RHOCP08134 193 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 IGHV1-8P0DP01 117 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 THRAP10827 490 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 IGFBP3P17936 291 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 LCN1P31025 176 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 GGT2P36268 569 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 NDUFA8P51970 172 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 UCNP55089 124 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 NDUFAF6Q330K2 333 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 ZNF658BQ4V348 819 aaPredicted RBP3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 TFDP3Q5H9I0 405 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 C15orf56Q8N910 161 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 OR10Z1Q8NGY1 313 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 OR51A7Q8NH64 312 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 LILRB4Q8NHJ6 448 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 FAM104AQ969W3 186 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 TEAD3Q99594 435 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 HSD17B10Q99714 261 aaKnown RBP3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 TREX1Q9NSU2 369 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 STMN3Q9NZ72 180 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 HYOU1Q9Y4L1 999 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 CHD9Q3L8U1 2897 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 CHD7Q9P2D1 2997 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 TRANK1O15050 2925 aa3.47□□□□□ -1.85
HMGB1P3-201ENST00000502802 CUL9Q8IWT3 2517 aa3.46□□□□□ -1.85
HMGB1P3-201ENST00000502802 VCANP13611 3396 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 CDH23Q9H251 3354 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 GOLGA8JA6NMD2 632 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 H7C2Y5 167 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 PTTG1O95997 202 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 NPPAP01160 153 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 GOLGA8HP0CJ92 632 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 CCL5P13501 91 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 PRKACBP22694 351 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 ARR3P36575 388 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 TALDO1P37837 337 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 CD151P48509 253 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 MNAT1P51948 309 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 HCCSP53701 268 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 RPL31P62899 125 aaKnown RBP3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 KDSRQ06136 332 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 GPR176Q14439 515 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 HSP90B2PQ58FF3 399 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 LCE3CQ5T5A8 94 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 TSPO2Q5TGU0 170 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 SLC30A8Q8IWU4 369 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 C15orf40Q8WUR7 153 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 TMEM234Q8WY98 164 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 PTX4Q96A99 478 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 CAMK2N2Q96S95 79 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 TSNAXQ99598 290 aaKnown RBP3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 NAPGQ99747 312 aaPredicted RBP3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 GABRG3Q99928 467 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 UTP23Q9BRU9 249 aaKnown RBP3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 LHX9Q9NQ69 397 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 NYAP2Q9P242 653 aa3.46□□□□□ -1.86
HMGB1P3-201ENST00000502802 PIKFYVEQ9Y2I7 2098 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 A0A0G2JMZ2 1700 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 LTBP2Q14767 1821 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 TRAV19A0A0A6YYK7 116 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 ANKRD20A5PA0PJZ0 165 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 SEC14L6B5MCN3 397 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 HSBP1L1C9JCN9 74 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 ALOX12BO75342 701 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 UPK1BO75841 260 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 DNAH10OSP0CZ25 163 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 GNRHRP30968 328 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 CD70P32970 193 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 DRD3P35462 400 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 RPL23P62829 140 aaKnown RBP3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 DYNLL1P63167 89 aaKnown RBP3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 DMTNQ08495 405 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 IFFO1Q0D2I5 559 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 MADCAM1Q13477 382 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 RBMY1FQ15415 496 aaKnown RBP3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 OR1Q1Q15612 314 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 TAL2Q16559 108 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 TMEM205Q6UW68 189 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 LINC01551Q86U37 167 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 CDKL3Q8IVW4 592 aaPredicted RBP3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 ZNF786Q8N393 782 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 OR5W2Q8NH69 310 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 COQ8AQ8NI60 647 aa3.45□□□□□ -1.86
HMGB1P3-201ENST00000502802 CDKL2Q92772 493 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms