RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 IL17DQ8TAD2 202 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF671Q8TAW3 534 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 AQP3Q92482 292 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 ZBTB9Q96C00 473 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 OR8B4Q96RC9 309 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 ISYNA1Q9NPH2 558 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 DPM3Q9P2X0 92 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 TMEM5Q9Y2B1 443 aa10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 SIRT4Q9Y6E7 314 aaPredicted RBP10.68□□□□□ -0.7
EXOSC3-207ENST00000490516 LINC01548A6NM66 108 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF732B4DXR9 585 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 CCRL2O00421 344 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 CDX1P47902 265 aaPredicted RBP10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 EDDM3BP56851 147 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 SMIM21Q3B7S5 101 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 BAIAP2L2Q6UXY1 529 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 PRSS45Q7RTY3 260 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 ZDHHC23Q8IYP9 409 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 FTMTQ8N4E7 242 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 RPP25LQ8N5L8 163 aaKnown RBP10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 DRAM1Q8N682 238 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNRF4Q8WWF5 429 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF714Q96N38 554 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 EBF4Q9BQW3 602 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 TMEM120AQ9BXJ8 343 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 TMEM133Q9H2Q1 129 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 RASL12Q9NYN1 266 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 OR14J1Q9UGF5 321 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 SESN1Q9Y6P5 492 aa10.67□□□□□ -0.7
EXOSC3-207ENST00000490516 RGS16O15492 202 aaPredicted RBP10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 MMP23AO75900 390 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 DNAJC8O75937 253 aaPredicted RBP10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 CST4P01036 141 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 IFNA14P01570 189 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 IFNA6P05013 189 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 CFL1P23528 166 aaKnown RBP10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 SNCBQ16143 134 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 KRT71Q3SY84 523 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 CXorf66Q5JRM2 361 aaPredicted RBP10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 NANOGP8Q6NSW7 305 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 HAGHLQ6PII5 290 aaPredicted RBP10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 VTCN1Q7Z7D3 282 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF429Q86V71 674 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 BATF2Q8N1L9 274 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 OR11H1Q8NG94 326 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 ABCB9Q9NP78 766 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 BRD7Q9NPI1 651 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 C19orf73Q9NVV2 129 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 DNAJC27Q9NZQ0 273 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 TNCP24821 2201 aa10.66□□□□□ -0.7
EXOSC3-207ENST00000490516 ABCA13Q86UQ4 5058 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 MUC4Q99102 2169 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 UNC119BA6NIH7 251 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF878C9JN71 531 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 SPARCP09486 303 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 OMPP47874 163 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 POU3F4P49335 361 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 IDH3AP50213 366 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 ARHGDIBP52566 201 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 ZNF121P58317 390 aaPredicted RBP10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 GNG3P63215 75 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 SELENOWP63302 87 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 CEP78Q5JTW2 689 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 SMARCD3Q6STE5 483 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 SLC35E3Q7Z769 313 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 C5orf56Q8N8D9 126 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 ASCC1Q8N9N2 400 aaKnown RBP10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 POC1AQ8NBT0 407 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 C4orf3Q8WVX3 66 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 HIST1H2AAQ96QV6 131 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 TMEM109Q9BVC6 243 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 OR10A2Q9H208 303 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 COMMD3-BMI1R4GMX3 469 aa10.65□□□□□ -0.7
EXOSC3-207ENST00000490516 FAM172BPA6NC97 362 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 H3BSH0 61 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 K7N7A8 449 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 ANGPT2O15123 496 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 SAP30O75446 220 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 HSD11B1P28845 292 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 KDELR2P33947 212 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 HAGHQ16775 308 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 PNLIPRP3Q17RR3 467 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 ASPHD1Q5U4P2 390 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 ZBTB49Q6ZSB9 765 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 FOXRED2Q8IWF2 684 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 Q8N1Y9 231 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 ABHD12Q8N2K0 398 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 PROKR2Q8NFJ6 384 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 OR51L1Q8NGJ5 315 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 ST6GALNAC6Q969X2 333 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 RETNQ9HD89 108 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 KIAA1456Q9P272 454 aa10.64□□□□□ -0.71
EXOSC3-207ENST00000490516 DNAH10Q8IVF4 4471 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 KIAA2026Q5HYC2 2103 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 LEUTXA8MZ59 168 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 ARPC3O15145 178 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 IGHG2P01859 326 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 SLC15A1P46059 708 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 MTNR1BP49286 362 aa10.63□□□□□ -0.71
EXOSC3-207ENST00000490516 GRB2P62993 217 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms