RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 MPZP25189 248 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 PEX19P40855 299 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 NKPD1Q17RQ9 610 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 SCCPDHQ8NBX0 429 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 AQP3Q92482 292 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 SLAMF9Q96A28 289 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 ELMOD3Q96FG2 381 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 DIRAS2Q96HU8 199 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 HIST1H2AAQ96QV6 131 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 MICU1Q9BPX6 476 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 ABCG5Q9H222 651 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 NEK6Q9HC98 313 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 FBLN5Q9UBX5 448 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 ING4Q9UNL4 249 aa12.33□□□□□ -0.44
LRIF1-202ENST00000485275 A1L4Q6 167 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 LRP5LA4QPB2 252 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 FAM25AB3EWG3 89 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 FAM25CB3EWG5 89 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 FAM25GB3EWG6 89 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 CDC14BO60729 498 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 GRPP07492 148 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 BCL3P20749 454 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 APOBEC3AP31941 199 aaPredicted RBP12.32□□□□□ -0.44
LRIF1-202ENST00000485275 ZNF81P51508 661 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 EFNB3Q15768 340 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 ZNF826PQ6ZT77 177 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 PXT1Q8NFP0 134 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 OR51F2Q8NH61 342 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 CEP19Q96LK0 163 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 DHRS9Q9BPW9 319 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 SLC22A4Q9H015 551 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 LPAR5Q9H1C0 372 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 TLNRD1Q9H1K6 362 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 CXXC4Q9H2H0 198 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 RBFOX1Q9NWB1 397 aaKnown RBP12.32□□□□□ -0.44
LRIF1-202ENST00000485275 IL36RNQ9UBH0 155 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 CRYBG3Q68DQ2 2970 aa12.32□□□□□ -0.44
LRIF1-202ENST00000485275 A0A0G2JMP0 313 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 A0A0X1KG70 313 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 PLSCR5A0PG75 271 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 A6NNC1 897 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 CLDN25C9JDP6 229 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 CDIPTO14735 213 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 PTBP3O95758 552 aaKnown RBP12.31□□□□□ -0.44
LRIF1-202ENST00000485275 MPIG6BO95866 241 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 CDK2P24941 298 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 CD200P41217 278 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 ART1P52961 327 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 SWI5Q1ZZU3 235 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 SNX29P2Q8IUI4 249 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 OR4M2Q8NGB6 313 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 GCDHQ92947 438 aaPredicted RBP12.31□□□□□ -0.44
LRIF1-202ENST00000485275 CPNE2Q96FN4 548 aaPredicted RBP12.31□□□□□ -0.44
LRIF1-202ENST00000485275 CMTM3Q96MX0 182 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 OR2V2Q96R30 315 aa12.31□□□□□ -0.44
LRIF1-202ENST00000485275 TMEM210A6NLX4 147 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 J3QKU1 62 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 J3QT63 122 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 CRTAPO75718 401 aaPredicted RBP12.3□□□□□ -0.44
LRIF1-202ENST00000485275 UBBP0CG47 229 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 PTHLHP12272 177 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 MGMTP16455 207 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 SELENOVP59797 346 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 IL24Q13007 206 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 OR2W3Q7Z3T1 314 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 ZNF573Q86YE8 665 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 TGIF2LYQ8IUE0 185 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 MUC15Q8N387 334 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 ITLN1Q8WWA0 313 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 PTX4Q96A99 478 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 MEGF10Q96KG7 1140 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 PKIBQ9C010 78 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 ELL3Q9HB65 397 aaPredicted RBP12.3□□□□□ -0.44
LRIF1-202ENST00000485275 UFSP2Q9NUQ7 469 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 IL36GQ9NZH8 169 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 NOP16Q9Y3C1 178 aaKnown RBP12.3□□□□□ -0.44
LRIF1-202ENST00000485275 FAM221AA4D161 298 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 C17orf100A8MU93 164 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 M0R233 179 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 RAB27BO00194 218 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 SOD3P08294 240 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 RAB6AP20340 208 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 PMELP40967 661 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 PTH2RP49190 550 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 RPS27AP62979 156 aaKnown RBP12.3□□□□□ -0.44
LRIF1-202ENST00000485275 PIGYQ3MUY2 71 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 SPANXN2Q5MJ10 180 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 FAM131AQ6UXB0 335 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 WDR82Q6UXN9 313 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 TMEM200AQ86VY9 491 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 ZSCAN4Q8NAM6 433 aaPredicted RBP12.3□□□□□ -0.44
LRIF1-202ENST00000485275 ABHD1Q96SE0 405 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 TMEM59Q9BXS4 323 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 SRRQ9GZT4 340 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 GHRLQ9UBU3 117 aa12.3□□□□□ -0.44
LRIF1-202ENST00000485275 FBN2P35556 2912 aa12.29□□□□□ -0.44
LRIF1-202ENST00000485275 HELZ2Q9BYK8 2649 aaKnown RBP12.29□□□□□ -0.44
LRIF1-202ENST00000485275 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.29□□□□□ -0.44
LRIF1-202ENST00000485275 FABP12A6NFH5 140 aa12.29□□□□□ -0.44
LRIF1-202ENST00000485275 FOXI3A8MTJ6 420 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms