RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 IGKV1D-8A0A087WSZ0 117 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 SPAARA0A1B0GVQ0 90 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 OR5H14A6NHG9 310 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 CEACAM18A8MTB9 384 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 XRCC2O43543 280 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 SERPINA5P05154 406 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 CD46P15529 392 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 PI3P19957 117 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 CCNOP22674 350 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 SRSF4Q08170 494 aaKnown RBP11.27□□□□□ -0.61
SEC13-216ENST00000479868 SRSF6Q13247 344 aaKnown RBP11.27□□□□□ -0.61
SEC13-216ENST00000479868 SLC10A1Q14973 349 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 AADACL3Q5VUY0 350 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 LPCAT3Q6P1A2 487 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 C3P1Q6ZMU1 363 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 TMPRSS7Q7RTY8 843 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 GLRX5Q86SX6 157 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 PIGCQ92535 297 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 SPSB4Q96A44 273 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 TMEM230Q96A57 120 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 PDCD10Q9BUL8 212 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 ACKR4Q9NPB9 350 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 CSAG2Q9Y5P2 127 aa11.27□□□□□ -0.61
SEC13-216ENST00000479868 SNAPC5O75971 98 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 DUS4LO95620 317 aaKnown RBP11.26□□□□□ -0.61
SEC13-216ENST00000479868 HLA-GP17693 338 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 OR3A2P47893 321 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 ARG2P78540 354 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 CLLU1Q5K131 121 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 PLCXD3Q63HM9 321 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 ASCL4Q6XD76 172 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 MOB3CQ70IA8 216 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 KCTD9Q7L273 389 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 VASH2Q86V25 355 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 LHFPL1Q86WI0 220 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 OR5AP2Q8NGF4 316 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 EMG1Q92979 244 aaKnown RBP11.26□□□□□ -0.61
SEC13-216ENST00000479868 CPNE2Q96FN4 548 aaPredicted RBP11.26□□□□□ -0.61
SEC13-216ENST00000479868 MFFQ9GZY8 342 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 EHFQ9NZC4 300 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 ATPIF1Q9UII2 106 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 CNOT1A5YKK6 2376 aaKnown RBP11.26□□□□□ -0.61
SEC13-216ENST00000479868 ZNF816-ZNF321PA0A0X1KG74 233 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 C5orf49A4QMS7 147 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 FAM25EA8MYX2 175 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 FTH1P19P0C7X4 201 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 RPA2P15927 270 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 AP2S1P53680 142 aaPredicted RBP11.26□□□□□ -0.61
SEC13-216ENST00000479868 TAS2R46P59540 309 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 ARL6IP1Q15041 203 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 PIGYQ3MUY2 71 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 LRRC37A5PQ49AS3 106 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 TMEM128Q5BJH2 165 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 ZNF766Q5HY98 468 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 RPUSD3Q6P087 351 aaKnown RBP11.26□□□□□ -0.61
SEC13-216ENST00000479868 OVCH2Q7RTZ1 564 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 FAAP24Q9BTP7 215 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 RNF122Q9H9V4 155 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 OSGIN2Q9Y236 505 aa11.26□□□□□ -0.61
SEC13-216ENST00000479868 SPENQ96T58 3664 aaKnown RBP11.26□□□□□ -0.61
SEC13-216ENST00000479868 CDRT15L2A8MXV6 281 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 CA11O75493 328 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 RP2O75695 350 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 ACTL6AO96019 429 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 SFTPBP07988 381 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 CD79AP11912 226 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 FUT6P51993 359 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 TAS2R31P59538 309 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 PDZK1IP1Q13113 114 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 CAMK2BQ13554 666 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 RNPS1Q15287 305 aaKnown RBP11.25□□□□□ -0.61
SEC13-216ENST00000479868 STK11Q15831 433 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 CHRFAM7AQ494W8 412 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 NHLRC3Q5JS37 347 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 PEG10Q86TG7 708 aaKnown RBP11.25□□□□□ -0.61
SEC13-216ENST00000479868 PPP1R1CQ8WVI7 109 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 RTBDNQ9BSG5 229 aaPredicted RBP11.25□□□□□ -0.61
SEC13-216ENST00000479868 GSX2Q9BZM3 304 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 PPA2Q9H2U2 334 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 LDAHQ9H6V9 325 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 ZNF552Q9H707 407 aaPredicted RBP11.25□□□□□ -0.61
SEC13-216ENST00000479868 SPRR3Q9UBC9 169 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 AUP1Q9Y679 476 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 DBX1A6NMT0 343 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 ZNF850A8MQ14 1090 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 GEMIN2O14893 280 aaKnown RBP11.25□□□□□ -0.61
SEC13-216ENST00000479868 NKX2-8O15522 239 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 FPR2P25090 351 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 ATP1B3P54709 279 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 ESCO2Q56NI9 601 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 ZNF546Q86UE3 836 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 CALHM1Q8IU99 346 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 MCEMP1Q8IX19 187 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 ZSCAN4Q8NAM6 433 aaPredicted RBP11.25□□□□□ -0.61
SEC13-216ENST00000479868 TMEM185AQ8NFB2 350 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 C12orf49Q9H741 205 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 CRIM1Q9NZV1 1036 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 PRSS50Q9UI38 385 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 AK3Q9UIJ7 227 aa11.25□□□□□ -0.61
SEC13-216ENST00000479868 GPR160Q9UJ42 338 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms