RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 AQP4P55087 323 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 SEC11AP67812 179 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 HSD11B1LQ7Z5J1 315 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 GBGT1Q8N5D6 347 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 OR5H6Q8NGV6 325 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 CERKQ8TCT0 537 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 LRRC29Q8WV35 223 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 RSRP1Q9BUV0 290 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 SIRT3Q9NTG7 399 aaPredicted RBP4.9□□□□□ -1.62
USF3-202ENST00000478658 HSFX1Q9UBD0 423 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 PRNDQ9UKY0 176 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 INSL5Q9Y5Q6 135 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 KDM4FA0A1W2PPD8 638 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 GGTLC3B5MD39 225 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 PRRT4C9JH25 899 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 HCRTR1O43613 425 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 SOX14O95416 240 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 RPL29P47914 159 aaKnown RBP4.9□□□□□ -1.62
USF3-202ENST00000478658 SEZ6L2Q6UXD5 910 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 FCRLAQ7L513 359 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 CCDC190Q86UF4 302 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 VSIG10LQ86VR7 867 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 RCC1LQ96I51 464 aaKnown RBP4.9□□□□□ -1.62
USF3-202ENST00000478658 MSLNLQ96KJ4 702 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 HIST1H4GQ99525 98 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 CNTD2Q9H8S5 307 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 SAP30LQ9HAJ7 183 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 CBLN4Q9NTU7 201 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 NHP2Q9NX24 153 aaKnown RBP4.9□□□□□ -1.62
USF3-202ENST00000478658 LOXL2Q9Y4K0 774 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 ANKRD36A6QL64 1941 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 M0R082 166 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 SDCBPO00560 298 aaPredicted RBP4.9□□□□□ -1.62
USF3-202ENST00000478658 SIGLEC6O43699 453 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 CA2P00918 260 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 SLC25A4P12235 298 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 LGALSLQ3ZCW2 172 aaPredicted RBP4.9□□□□□ -1.62
USF3-202ENST00000478658 RNFT1Q5M7Z0 435 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 ZNF385CQ66K41 422 aaPredicted RBP4.9□□□□□ -1.62
USF3-202ENST00000478658 ZNF813Q6ZN06 617 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 OR5M9Q8NGP3 310 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 OR10AC1Q8NH08 325 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 DYRK2Q92630 601 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 IGSF8Q969P0 613 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 TMEM38AQ9H6F2 299 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 SLC17A5Q9NRA2 495 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 SPANXB1Q9NS25 103 aaPredicted RBP4.9□□□□□ -1.62
USF3-202ENST00000478658 COA4Q9NYJ1 87 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 CYSLTR1Q9Y271 337 aa4.9□□□□□ -1.62
USF3-202ENST00000478658 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 C9orf172C9J069 976 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 GPR31O00270 319 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 UTS2O95399 124 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 GPR4P46093 362 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ZNF658BQ4V348 819 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 GTSCR1Q86UQ5 136 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ZDHHC22Q8N966 263 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 MVB12AQ96EY5 273 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 FEVQ99581 238 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 COX11Q9Y6N1 276 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 RGPD8O14715 1765 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 RGPD5Q99666 1765 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 UBR1Q8IWV7 1749 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 UNC13CQ8NB66 2214 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 TCRBV5S2A0A599 114 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ANKRD65E5RJM6 399 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 M0R1B8 84 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 FCN1O00602 326 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 FECHP22830 423 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 OR10J1P30954 320 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 HYAL2Q12891 473 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 SIX1Q15475 284 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 MLF2Q15773 248 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 BCL7AQ4VC05 210 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ASB10Q8WXI3 467 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 C10orf35Q96D05 121 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ZBTB45Q96K62 511 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 ASB16Q96NS5 453 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 C20orf24Q9BUV8 137 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 OR51B6Q9H340 312 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 FBXL15Q9H469 300 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 SYNPO2LQ9H987 977 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 UQCC1Q9NVA1 299 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 TMEM56-RWDD3S4R434 201 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ZGRF1Q86YA3 2104 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 MEIKINA0A087WXM9 373 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 MGPP08493 103 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 TRA2AQ13595 282 aaKnown RBP eCLIP4.9□□□□□ -1.63
USF3-202ENST00000478658 CXorf66Q5JRM2 361 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 BATF2Q8N1L9 274 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 FAM24BQ8N5W8 94 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 C2CD4AQ8NCU7 369 aaPredicted RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 ZNF502Q8TBZ5 544 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 TMEM171Q8WVE6 324 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 MISP3Q96FF7 219 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 OR8B4Q96RC9 309 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 ACER3Q9NUN7 267 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 YLPM1P49750 1951 aaKnown RBP4.9□□□□□ -1.63
USF3-202ENST00000478658 TRBV7-9A0A0J9YWB2 115 aa4.9□□□□□ -1.63
USF3-202ENST00000478658 VWC2LB2RUY7 222 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 308.7 ms