RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 IGHV2-5P01817 119 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 EDN1P05305 212 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 CD48P09326 243 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 HLA-EP13747 358 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 FASP25445 335 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ETV6P41212 452 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNF134P52741 427 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 DVL1P1P54792 670 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ID2Q02363 134 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 KLRB1Q12918 225 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 RBMS2Q15434 407 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 SNAI3Q3KNW1 292 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 PYY3Q5JQD4 70 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 HIST2H3PS2Q5TEC6 136 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 LRRC55Q6ZSA7 311 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 TRIM48Q8IWZ4 208 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 CMTM1Q8IZ96 169 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 H1FOOQ8IZA3 346 aaPredicted RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 TCTE3Q8IZS6 198 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 D2HGDHQ8N465 521 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 FITM2Q8N6M3 262 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 PNPLA1Q8N8W4 532 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 UBAC2Q8NBM4 344 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 OR4M1Q8NGD0 313 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 OR10G4Q8NGN3 311 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 SPPL2BQ8TCT7 592 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 SLC38A5Q8WUX1 472 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 LCN9Q8WX39 176 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNF488Q96MN9 340 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 TAPBPLQ9BX59 468 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 MAP1LC3BQ9GZQ8 125 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 ABCG5Q9H222 651 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 POLD4Q9HCU8 107 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 RPL36Q9Y3U8 105 aaKnown RBP5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 U3KQ87 197 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 IGSF9BQ9UPX0 1349 aa5.27□□□□□ -1.57
SMARCE1-208ENST00000474246 JMJD1CQ15652 2540 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 TRAV30A0A087WSZ9 112 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 A0A087WUJ7 227 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 KIR2DS5A0A0G2JLQ3 304 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 A0A0G2JNG1 304 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 TMEM72A0PK05 275 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 DEGS1O15121 323 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 EIF4E2O60573 245 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 MPDU1O75352 247 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 ATP6AP2O75787 350 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 MMP23AO75900 390 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 CT45A8P0DMV1 189 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 CT45A9P0DMV2 189 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 RPL12P30050 165 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 LOXL3P58215 753 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 OSTNP61366 133 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 SELENOWP63302 87 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 FABP9Q0Z7S8 132 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 KIR2DS5Q14953 304 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 SRSF7Q16629 238 aaKnown RBP eCLIP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 Q5BKY6 102 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 CT45A2Q5DJT8 189 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 FFAR4Q5NUL3 377 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 TMEM69Q5SWH9 247 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 CYP2R1Q6VVX0 501 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 MUC15Q8N387 334 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 RYBPQ8N488 228 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 NAT16Q8N8M0 369 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 SLC16A11Q8NCK7 471 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 OR10R2Q8NGX6 335 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 XAGE5Q8WWM1 108 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 ARL11Q969Q4 196 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 HIST1H2BAQ96A08 127 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 PEX11GQ96HA9 241 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 SLC35G5Q96KT7 338 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 FYTTD1Q96QD9 318 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 CPVLQ9H3G5 476 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 FNDC4Q9H6D8 234 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 ARMCX1Q9P291 453 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 TCF19Q9Y242 345 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 ETV7Q9Y603 341 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 WSB1Q9Y6I7 421 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 IGHV2-70DA0A0C4DH43 119 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 A0A1B0GU03 582 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 EXOC1LA0A1B0GW35 172 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 A0A1W2PQJ5 194 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 A0A1W2PRE2 83 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 ZNF587BE7ETH6 402 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 PPIHO43447 177 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 PLPP2O43688 288 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 IGF1P05019 195 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 SNRPCP09234 159 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 SULT1A3P0DMM9 295 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 SULT1A4P0DMN0 295 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 OR5H8P0DN80 308 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 MAOAP21397 527 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 HRH2P25021 359 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 LEPP41159 167 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 AQP5P55064 265 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 RPL8P62917 257 aaKnown RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 OR5I1Q13606 314 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 ACSF3Q4G176 576 aaPredicted RBP5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 CLEC12AQ5QGZ9 265 aa5.26□□□□□ -1.57
SMARCE1-208ENST00000474246 CDC42EP5Q6NZY7 148 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms