RNA–Protein interactions for RNA: ENST00000471968.1

HDAC3-206, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-206ENST00000471968 C16orf45Q96MC5 204 aaPredicted RBP4.81□□□□□ -1.64
HDAC3-206ENST00000471968 MNTQ99583 582 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 RASL11BQ9BPW5 248 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 PRSS27Q9BQR3 290 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 SRSF8Q9BRL6 282 aaKnown RBP4.81□□□□□ -1.64
HDAC3-206ENST00000471968 C1orf50Q9BV19 199 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 BARHL1Q9BZE3 327 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 HDHD2Q9H0R4 259 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 TMEM27Q9HBJ8 222 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 FIS1Q9Y3D6 152 aa4.81□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF850A8MQ14 1090 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 OOSP1A8MZH6 123 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 LY6LH3BQJ8 138 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 H7C1C5 153 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 OR5F1O95221 314 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 IGLV1-47P01700 117 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 TK1P04183 234 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 NEFHP12036 1026 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 TCP1P17987 556 aaKnown RBP4.8□□□□□ -1.64
HDAC3-206ENST00000471968 ANOS1P23352 680 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 CRISP3P54108 245 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 GNG11P61952 73 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 LCN6P62502 163 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 HLA-DRB5Q30154 266 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 SNAI3Q3KNW1 292 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 AGBL2Q5U5Z8 902 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF662Q6ZS27 426 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 ZDHHC13Q8IUH4 622 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 RIMKLAQ8IXN7 391 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 CCNYL1Q8N7R7 359 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 CYB561A3Q8NBI2 242 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 MNS1Q8NEH6 495 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 FNDC8Q8TC99 324 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 FBXO25Q8TCJ0 367 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 TOMM40LQ969M1 308 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 RPEQ96AT9 228 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 CREB3L1Q96BA8 519 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 MS4A14Q96JA4 679 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 RARRES2Q99969 163 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 PNPOQ9NVS9 261 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 POLR1DQ9Y2S0 133 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 IFT52Q9Y366 437 aa4.8□□□□□ -1.64
HDAC3-206ENST00000471968 FAM90A10PA6NDY2 464 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 K7N7A8 449 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 TOR1AO14656 332 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 MITFO75030 526 aaPredicted RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 MTRF1O75570 445 aaKnown RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 PLA2G1BP04054 148 aaKnown RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 ZP3P21754 424 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 HLA-DMBP28068 263 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 AQP1P29972 269 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 FCGR2BP31994 310 aaPredicted RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 PRDX2P32119 198 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 SOX6P35712 828 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 MECP2P51608 486 aaKnown RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 PRKAA2P54646 552 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 DYRK1AQ13627 763 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 KLF5Q13887 457 aaPredicted RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 ZSCAN26Q16670 478 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 GLYATL3Q5SZD4 288 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 SWT1Q5T5J6 900 aaKnown RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 LCE2AQ5TA79 106 aaPredicted RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 CORO6Q6QEF8 472 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 SLC16A9Q7RTY1 509 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 RTN4RL2Q86UN3 420 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 SLC35F6Q8N357 371 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 C15orf53Q8NAA6 179 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 L3HYPDHQ96EM0 354 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 NAPGQ99747 312 aaPredicted RBP4.79□□□□□ -1.64
HDAC3-206ENST00000471968 MICU1Q9BPX6 476 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 TUBB1Q9H4B7 451 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF446Q9NWS9 450 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 CALML5Q9NZT1 146 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF580Q9UK33 172 aa4.79□□□□□ -1.64
HDAC3-206ENST00000471968 TEX13CA0A0J9YWL9 993 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 MPZL2O60487 215 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 PEX11AO75192 247 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 ATP5F1P24539 256 aaPredicted RBP4.78□□□□□ -1.64
HDAC3-206ENST00000471968 SLC6A6P31641 620 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 KRTAP10-1P60331 282 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 KRTAP27-1Q3LI81 207 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 PRAMEF5Q5TYX0 476 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 TTC33Q6PID6 262 aaPredicted RBP4.78□□□□□ -1.64
HDAC3-206ENST00000471968 CREG2Q8IUH2 290 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 GJC3Q8NFK1 279 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 SLC38A5Q8WUX1 472 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 EAF1Q96JC9 268 aaPredicted RBP4.78□□□□□ -1.64
HDAC3-206ENST00000471968 NRIP2Q9BQI9 281 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 SCRT1Q9BWW7 348 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 FAM107BQ9H098 131 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 ZNF286AQ9HBT8 521 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 PCDHB16Q9NRJ7 776 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 MRM2Q9UI43 246 aaKnown RBP4.78□□□□□ -1.64
HDAC3-206ENST00000471968 ADAM30Q9UKF2 790 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 SNX12Q9UMY4 172 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 RRP15Q9Y3B9 282 aaKnown RBP4.78□□□□□ -1.64
HDAC3-206ENST00000471968 SAR1BQ9Y6B6 198 aa4.78□□□□□ -1.64
HDAC3-206ENST00000471968 A0A0B4J203 849 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 TRAV41A0A0B4J266 112 aa4.77□□□□□ -1.65
HDAC3-206ENST00000471968 A0A0G2JPF8 293 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms