RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 IFNA5P01569 189 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 RPS17P08708 135 aaKnown RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR4Q2P0C623 313 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 FOLR2P14207 255 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 HLA-GP17693 338 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 RAB4AP20338 218 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 PSMB1P20618 241 aaKnown RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 F8A1P23610 371 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR1E1P30953 314 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 CD52P31358 61 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 BTCP35070 178 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 MAGEA3P43357 314 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 RPL14P50914 215 aaKnown RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 CCL23P55773 120 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 DLX1P56177 255 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 ARPP19P56211 112 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 RHOAP61586 193 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 NUTF2P61970 127 aaKnown RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 DYNLT1P63172 113 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 C2orf80Q0P641 193 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 STX4Q12846 297 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 TFDP2Q14188 446 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 MOGQ16653 247 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 Q1RN00 199 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZBED5Q49AG3 693 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 PRR30Q53SZ7 412 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 C1orf100Q5SVJ3 147 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 LCN12Q6JVE5 192 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 H2AFVQ71UI9 128 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 DEFB128Q7Z7B8 93 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 TMEM135Q86UB9 458 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC13A5Q86YT5 568 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 CYP4Z2PQ8N1L4 340 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 MREGQ8N565 214 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 C12orf29Q8N999 325 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 KLHL30-AS1Q8NEE0 82 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR51A7Q8NH64 312 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 JOSD2Q8TAC2 188 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 GTSF1Q8WW33 167 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 C1orf54Q8WWF1 131 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 OR8D1Q8WZ84 308 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 IL22RA2Q969J5 263 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 RPEQ96AT9 228 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 PIK3IP1Q96FE7 263 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 DUS3LQ96G46 650 aaKnown RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 ANKRD36BP1Q96IX9 119 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF75AQ96N20 296 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 WFIKKN1Q96NZ8 548 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 RIOK2Q9BVS4 552 aaKnown RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 C19orf24Q9BVV8 132 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 CALN1Q9BXU9 219 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC25A22Q9H936 323 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 PRSS16Q9NQE7 514 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 PLEKHJ1Q9NW61 149 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 CLN6Q9NWW5 311 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 MARCH5Q9NX47 278 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 PAQR5Q9NXK6 330 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 TAS2R9Q9NYW1 312 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 IL37Q9NZH6 218 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC22A13Q9Y226 551 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 RCL1Q9Y2P8 373 aaKnown RBP2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 LRRC42Q9Y546 428 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 SNX10Q9Y5X0 201 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 MROH7Q68CQ1 1323 aa2.82□□□□□ -1.96
HMGB1P25-201ENST00000468402 SCN2AQ99250 2005 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 NOTCH4Q99466 2003 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 A0A1W2PPR1 153 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 CIB4A0PJX0 185 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 H0Y980 276 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 H0YJX3 145 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 H3BNH8 94 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 M0QXV9 152 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 M0QZ92 97 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 DFFAO00273 331 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 PFDN6O15212 129 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 MRPS12O15235 138 aaKnown RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 RAD51CO43502 376 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ATP8B1O43520 1251 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 SGCEO43556 437 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 FAM189A1O60320 539 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 SLC16A7O60669 478 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF780AO75290 641 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 SERF1AO75920 110 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 RAB36O95755 333 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ORM1P02763 201 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 CATP04040 527 aaKnown RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 THY1P04216 161 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 FABP1P07148 127 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 CTXN2P0C2S0 81 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF883P0CG24 379 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 CYBAP13498 195 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZP3P21754 424 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 AK4P27144 223 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 SHC1P29353 583 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 MAS1LP35410 378 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 ZNF45Q02386 682 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TSPAN31Q12999 210 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 AQP6Q13520 282 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 TPBGQ13641 420 aa2.81□□□□□ -1.96
HMGB1P25-201ENST00000468402 PRPSAP1Q14558 356 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms