RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 OR13C3Q8NGS6 347 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 NANPQ8TBE9 248 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 DSCAML1Q8TD84 2053 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 HAVCR2Q8TDQ0 301 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 ST8SIA4Q92187 359 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 TMIGD2Q96BF3 282 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF488Q96MN9 340 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 DNTTIP1Q9H147 329 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 NLKQ9UBE8 527 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 SLC7A11Q9UPY5 501 aa10.71□□□□□ -0.69
COL5A1-206ENST00000465877 EXOSC1Q9Y3B2 195 aaKnown RBP10.71□□□□□ -0.69
COL5A1-206ENST00000465877 IGKV1-27A0A075B6S5 117 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 TRAV40A0A0B4J280 105 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 FAM230AA0A1W2PPH8 454 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 TMEM212A6NML5 194 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 OR2AT4A6NND4 320 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 ZFPL1O95159 310 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 SERPINA3P01011 423 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 TFF1P04155 84 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 PIPP12273 146 aaPredicted RBP10.7□□□□□ -0.7
COL5A1-206ENST00000465877 SELLP14151 372 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 AMY2BP19961 511 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 GBX2P52951 348 aaPredicted RBP10.7□□□□□ -0.7
COL5A1-206ENST00000465877 IL13RA1P78552 427 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 PAX8Q06710 450 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 OR2G6Q5TZ20 316 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 CD276Q5ZPR3 534 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 XAF1Q6GPH4 301 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 LAIR2Q6ISS4 152 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 ZNF788Q6ZQV5 615 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 UTS2BQ765I0 119 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 OR5T2Q8NGG2 359 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 ANGPTL6Q8NI99 470 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 ZNF671Q8TAW3 534 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 FBLIM1Q8WUP2 373 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 TFAP2CQ92754 450 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 BORCS8Q96FH0 119 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 GAFA1Q96PS6 74 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 PKIBQ9C010 78 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 COMMD4Q9H0A8 199 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 RASSF4Q9H2L5 321 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 ZNF222Q9UK12 451 aa10.7□□□□□ -0.7
COL5A1-206ENST00000465877 CAB39Q9Y376 341 aaPredicted RBP10.7□□□□□ -0.7
COL5A1-206ENST00000465877 IGKV1D-17A0A075B6S4 117 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 KIR2DS1A0A191URI9 304 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 TCF21O43680 179 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 XPNPEP2O43895 674 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 NXPH2O95156 264 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 PLATP00750 562 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 PPIAL4GP0DN37 164 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 AZGP1P25311 298 aaKnown RBP10.69□□□□□ -0.7
COL5A1-206ENST00000465877 FUT6P51993 359 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 GTF2A1P52655 376 aaPredicted RBP10.69□□□□□ -0.7
COL5A1-206ENST00000465877 SRSF2Q01130 221 aaKnown RBP10.69□□□□□ -0.7
COL5A1-206ENST00000465877 IL24Q13007 206 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 IKZF1Q13422 519 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 CDK5R1Q15078 307 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 KLF17Q5JT82 389 aaPredicted RBP10.69□□□□□ -0.7
COL5A1-206ENST00000465877 ATPAF1Q5TC12 328 aaPredicted RBP10.69□□□□□ -0.7
COL5A1-206ENST00000465877 TMPRSS11AQ6ZMR5 421 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 ACP7Q6ZNF0 438 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 AHSA2Q719I0 299 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 BTN2A1Q7KYR7 527 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 ANGPTL5Q86XS5 388 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 BATF2Q8N1L9 274 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 OR13C9Q8NGT0 318 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 OR5AK2Q8NH90 309 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 RPS4Y2Q8TD47 263 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 TSEN15Q8WW01 171 aaKnown RBP10.69□□□□□ -0.7
COL5A1-206ENST00000465877 UPRTQ96BW1 309 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 FGGYQ96C11 551 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 TMEM80Q96HE8 168 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 OPALINQ96PE5 141 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 PDCD1LG2Q9BQ51 273 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 NRIP2Q9BQI9 281 aa10.69□□□□□ -0.7
COL5A1-206ENST00000465877 CNOT2Q9NZN8 540 aaKnown RBP10.69□□□□□ -0.7
COL5A1-206ENST00000465877 IGKV1-9A0A0C4DH69 117 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 TRBV2A0A0J9YWF9 115 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 EFCAB10A6NFE3 127 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 H0YJX3 145 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 SIGLEC5O15389 551 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 NDUFB3O43676 98 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 NOS1APO75052 506 aaPredicted RBP10.68□□□□□ -0.7
COL5A1-206ENST00000465877 RGS9O75916 674 aaPredicted RBP10.68□□□□□ -0.7
COL5A1-206ENST00000465877 ECDO95905 644 aaPredicted RBP10.68□□□□□ -0.7
COL5A1-206ENST00000465877 IGHV4-38-2P0DP08 117 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 PSG2P11465 335 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 GABRA2P47869 451 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 RBP2P50120 134 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 FGF12P61328 243 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 ST3GAL4Q11206 333 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 MED21Q13503 144 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 DGUOKQ16854 277 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 C11orf91Q3C1V1 193 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 CCDC58Q4VC31 144 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 LRRC10Q5BKY1 277 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 LHFPL2Q6ZUX7 228 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 BPIFB2Q8N4F0 458 aa10.68□□□□□ -0.7
COL5A1-206ENST00000465877 PNLDC1Q8NA58 520 aaKnown RBP10.68□□□□□ -0.7
COL5A1-206ENST00000465877 DNAAF1Q8NEP3 725 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 306.7 ms