RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 OPN1MW3P0DN78 364 aa18.51■□□□□ 0.55
USP42-205ENST00000465073 FAHP16930 419 aa18.51■□□□□ 0.55
USP42-205ENST00000465073 PRDX2P32119 198 aa18.51■□□□□ 0.55
USP42-205ENST00000465073 ZNF684Q5T5D7 378 aa18.51■□□□□ 0.55
USP42-205ENST00000465073 LIAT1Q6ZQX7 453 aa18.51■□□□□ 0.55
USP42-205ENST00000465073 AQP12AQ8IXF9 295 aa18.51■□□□□ 0.55
USP42-205ENST00000465073 ZNF679Q8IYX0 411 aa18.51■□□□□ 0.55
USP42-205ENST00000465073 SLC25A19Q9HC21 320 aa18.51■□□□□ 0.55
USP42-205ENST00000465073 PRKACGP22612 351 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 ZNF829Q3KNS6 432 aaPredicted RBP18.5■□□□□ 0.55
USP42-205ENST00000465073 TMEM236Q5W0B7 351 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 ZNF573Q86YE8 665 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 HS3ST5Q8IZT8 346 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 C11orf42Q8N5U0 333 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 CLPTM1LQ96KA5 538 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 OR8B4Q96RC9 309 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 NPFFR1Q9GZQ6 430 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 NUFIP1Q9UHK0 495 aaKnown RBP18.5■□□□□ 0.55
USP42-205ENST00000465073 FOXJ3Q9UPW0 622 aa18.5■□□□□ 0.55
USP42-205ENST00000465073 J3QT63 122 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 NOS1APO75052 506 aaPredicted RBP18.49■□□□□ 0.55
USP42-205ENST00000465073 DHRS3O75911 302 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 T-ENOLP0DO92 83 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 RIDAP52758 137 aaKnown RBP18.49■□□□□ 0.55
USP42-205ENST00000465073 LGALS4P56470 323 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 SNAPC1Q16533 368 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 KLHDC1Q8N7A1 406 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 C1orf21Q9H246 121 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 USE1Q9NZ43 259 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 POLDIP2Q9Y2S7 368 aa18.49■□□□□ 0.55
USP42-205ENST00000465073 MRPL3P09001 348 aaKnown RBP18.48■□□□□ 0.55
USP42-205ENST00000465073 PGA5P0DJD9 388 aa18.48■□□□□ 0.55
USP42-205ENST00000465073 HAAOP46952 286 aa18.48■□□□□ 0.55
USP42-205ENST00000465073 BEAN1Q3B7T3 259 aa18.48■□□□□ 0.55
USP42-205ENST00000465073 LCN1P1Q5VSP4 162 aa18.48■□□□□ 0.55
USP42-205ENST00000465073 OR2T27Q8NH04 317 aa18.48■□□□□ 0.55
USP42-205ENST00000465073 PPP1R14AQ96A00 147 aa18.48■□□□□ 0.55
USP42-205ENST00000465073 ZNF488Q96MN9 340 aa18.48■□□□□ 0.55
USP42-205ENST00000465073 TVP23BQ9NYZ1 205 aa18.48■□□□□ 0.55
USP42-205ENST00000465073 CCDC182A6NF36 153 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 PRR32B1ATL7 298 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 G3V4G9 280 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 SYNGR1O43759 233 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 PAX6P26367 422 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 ERVFRD-1P60508 538 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 CLVS2Q5SYC1 327 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 KPRPQ5T749 579 aaPredicted RBP18.47■□□□□ 0.55
USP42-205ENST00000465073 CALHM1Q8IU99 346 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 C11orf44Q8N8P7 122 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 OR4M1Q8NGD0 313 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 PIFOQ8TCI5 191 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 NRIP2Q9BQI9 281 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 THTPAQ9BU02 230 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 IKZF2Q9UKS7 526 aa18.47■□□□□ 0.55
USP42-205ENST00000465073 NXPH2O95156 264 aa18.46■□□□□ 0.55
USP42-205ENST00000465073 TTRP02766 147 aa18.46■□□□□ 0.55
USP42-205ENST00000465073 COX7A1P24310 79 aa18.46■□□□□ 0.55
USP42-205ENST00000465073 FBLN7Q53RD9 439 aa18.46■□□□□ 0.55
USP42-205ENST00000465073 TMEM42Q69YG0 159 aa18.46■□□□□ 0.55
USP42-205ENST00000465073 DNAJC9Q8WXX5 260 aa18.46■□□□□ 0.55
USP42-205ENST00000465073 DNAJB9Q9UBS3 223 aa18.46■□□□□ 0.55
USP42-205ENST00000465073 COPS3Q9UNS2 423 aa18.46■□□□□ 0.55
USP42-205ENST00000465073 PQLC2LA1A4F0 135 aa18.46■□□□□ 0.54
USP42-205ENST00000465073 VGLL3A8MV65 326 aa18.46■□□□□ 0.54
USP42-205ENST00000465073 DLGAP1O14490 977 aa18.46■□□□□ 0.54
USP42-205ENST00000465073 CHST1O43916 411 aa18.46■□□□□ 0.54
USP42-205ENST00000465073 CCL3L1P16619 93 aa18.46■□□□□ 0.54
USP42-205ENST00000465073 BMXP51813 675 aa18.46■□□□□ 0.54
USP42-205ENST00000465073 MFGE8Q08431 387 aaPredicted RBP18.46■□□□□ 0.54
USP42-205ENST00000465073 CDCA4Q9BXL8 241 aa18.46■□□□□ 0.54
USP42-205ENST00000465073 FAM90A8PA6NJQ4 464 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 LOC110117498-PIK3R3F6TDL0 507 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 TK1P04183 234 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 VSIG10L2P0DP72 767 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 CEBPDP49716 269 aaPredicted RBP18.45■□□□□ 0.54
USP42-205ENST00000465073 CRISP1P54107 249 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 ACTR3P61158 418 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 SAMD5Q5TGI4 173 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 CNN2Q99439 309 aaKnown RBP18.45■□□□□ 0.54
USP42-205ENST00000465073 MOB1AQ9H8S9 216 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 HES4Q9HCC6 221 aa18.45■□□□□ 0.54
USP42-205ENST00000465073 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.45■□□□□ 0.54
USP42-205ENST00000465073 SRSF10O75494 262 aaKnown RBP18.44■□□□□ 0.54
USP42-205ENST00000465073 MPZP25189 248 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 ESRRGP62508 458 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 ZNF273Q14593 569 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 ASRGL1Q7L266 308 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 CCDC197Q8NCU1 140 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 MNTQ99583 582 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 NKX3-1Q99801 234 aaPredicted RBP18.44■□□□□ 0.54
USP42-205ENST00000465073 TTTY10Q9BZA0 68 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 PAPOLBQ9NRJ5 636 aaKnown RBP18.44■□□□□ 0.54
USP42-205ENST00000465073 GPR173Q9NS66 373 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 GTF2A1LQ9UNN4 478 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 V9GYS6 101 aa18.44■□□□□ 0.54
USP42-205ENST00000465073 MEGF11A6BM72 1044 aa18.43■□□□□ 0.54
USP42-205ENST00000465073 C17orf98A8MV24 154 aa18.43■□□□□ 0.54
USP42-205ENST00000465073 CBX1P83916 185 aa18.43■□□□□ 0.54
USP42-205ENST00000465073 BCL2L15Q5TBC7 163 aa18.43■□□□□ 0.54
USP42-205ENST00000465073 HIST2H2BDQ6DRA6 164 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms