RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 GADD45AP24522 165 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 XCR1P46094 333 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 CTBP2P56545 445 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 RHOBP62745 196 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 UBA52P62987 128 aaKnown RBP4.36□□□□□ -1.71
EPHA3-202ENST00000452448 RUNX1Q01196 453 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 ACSM2AQ08AH3 577 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 OR8B8Q15620 311 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 TMEM196Q5HYL7 178 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 CRB2Q5IJ48 1285 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 CLEC12AQ5QGZ9 265 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 ACSM2BQ68CK6 577 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 AADACL2Q6P093 401 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 ARL9Q6T311 187 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 OAFQ86UD1 273 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF761Q86XN6 746 aaPredicted RBP4.36□□□□□ -1.71
EPHA3-202ENST00000452448 INO80EQ8NBZ0 244 aaPredicted RBP4.36□□□□□ -1.71
EPHA3-202ENST00000452448 CHST4Q8NCG5 386 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 OR2T12Q8NG77 320 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 PROKR1Q8TCW9 393 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 MZB1Q8WU39 189 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 MOB3AQ96BX8 217 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 TBX15Q96SF7 602 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 PAAF1Q9BRP4 392 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 AP5S1Q9NUS5 200 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 MRPL27Q9P0M9 148 aaKnown RBP4.36□□□□□ -1.71
EPHA3-202ENST00000452448 CHST2Q9Y4C5 530 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 ORC6Q9Y5N6 252 aa4.36□□□□□ -1.71
EPHA3-202ENST00000452448 ATRNL1Q5VV63 1379 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 FOXI3A8MTJ6 420 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 TNFSF11O14788 317 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 FGF17O60258 216 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 NKX2-2O95096 273 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 HLA-DQB1P01920 261 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 MAS1P04201 325 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 CD14P08571 375 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 FASP25445 335 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 OR10J1P30954 320 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 AVPR1BP47901 424 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 INPP1P49441 399 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF83P51522 516 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF140P52738 457 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 SELENOWP63302 87 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 DLX2Q07687 328 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 HSD52Q0P140 79 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 VWC2Q2TAL6 325 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 MST1LQ2TV78 715 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 LRRC75BQ2VPJ9 315 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 TMEM69Q5SWH9 247 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 C1orf220Q5T0J3 134 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF841Q6ZN19 808 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 MEPCEQ7L2J0 689 aaKnown RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 LRP11Q86VZ4 500 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 GKN2Q86XP6 184 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 Q8NA96 180 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 OR4N2Q8NGD1 307 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 OR1B1Q8NGR6 318 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF418Q8TF45 676 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 WIPF2Q8TF74 440 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 OR5P2Q8WZ92 322 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ZG16BQ96DA0 208 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 CDKN2AIPNLQ96HQ2 116 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 KCTD7Q96MP8 289 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 COPS8Q99627 209 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 MGLLQ99685 303 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 NAA38Q9BRA0 125 aaKnown RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 PBDC1Q9BVG4 233 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 C19orf24Q9BVV8 132 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 SYNPO2LQ9H987 977 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 NOX4Q9NPH5 578 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 LYRM2Q9NU23 88 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 FBXO4Q9UKT5 387 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 CMAHPQ9Y471 501 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 SLC25A12O75746 678 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 TNFSF13O75888 250 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 CDRT1O95170 752 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 CELA2BP08218 269 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 OR4Q2P0C623 313 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 SMIM17P0DL12 118 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 TCN2P20062 427 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 MDH2P40926 338 aaKnown RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 TCTAP57738 103 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ZIC1Q15915 447 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 DCAF4L1Q3SXM0 396 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 XP32Q5T750 250 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF776Q68DI1 518 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 C6orf120Q7Z4R8 191 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 PRRT2Q7Z6L0 340 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 SIAH3Q8IW03 269 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 FBXO16Q8IX29 292 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 OR5A2Q8NGI9 324 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ZNF488Q96MN9 340 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 ANAPC13Q9BS18 74 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 OR11A1Q9GZK7 315 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 TXNIPQ9H3M7 391 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 RBKSQ9H477 322 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 RALYQ9UKM9 306 aaKnown RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 FOXA2Q9Y261 457 aaPredicted RBP4.35□□□□□ -1.71
EPHA3-202ENST00000452448 TPRKBQ9Y3C4 175 aa4.35□□□□□ -1.71
EPHA3-202ENST00000452448 A0A0J9YY10 115 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms