RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 SLC34A1Q06495 639 aa14.5□□□□□ -0.09
CHCHD3-203ENST00000448878 PPP1R8Q12972 351 aaKnown RBP14.5□□□□□ -0.09
CHCHD3-203ENST00000448878 SMIM21Q3B7S5 101 aa14.5□□□□□ -0.09
CHCHD3-203ENST00000448878 PLCXD3Q63HM9 321 aa14.5□□□□□ -0.09
CHCHD3-203ENST00000448878 BATF2Q8N1L9 274 aa14.5□□□□□ -0.09
CHCHD3-203ENST00000448878 AQP11Q8NBQ7 271 aa14.5□□□□□ -0.09
CHCHD3-203ENST00000448878 OR8B12Q8NGG6 310 aa14.5□□□□□ -0.09
CHCHD3-203ENST00000448878 CMTM5Q96DZ9 223 aa14.5□□□□□ -0.09
CHCHD3-203ENST00000448878 GSC2O15499 205 aa14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 JUNBP17275 347 aaPredicted RBP14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 OR5A2Q8NGI9 324 aa14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 DPF1Q92782 380 aa14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 VIPAS39Q9H9C1 493 aa14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 TSSC4Q9Y5U2 329 aaPredicted RBP14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 LYVE1Q9Y5Y7 322 aa14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 COL7A1Q02388 2944 aa14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 RYR3Q15413 4870 aa14.49□□□□□ -0.09
CHCHD3-203ENST00000448878 SELENOFO60613 162 aa14.48□□□□□ -0.09
CHCHD3-203ENST00000448878 NXPH2O95156 264 aa14.48□□□□□ -0.09
CHCHD3-203ENST00000448878 DUS4LO95620 317 aaKnown RBP14.48□□□□□ -0.09
CHCHD3-203ENST00000448878 H2AFXP16104 143 aaPredicted RBP14.48□□□□□ -0.09
CHCHD3-203ENST00000448878 KRT77Q7Z794 578 aa14.48□□□□□ -0.09
CHCHD3-203ENST00000448878 CALHM1Q8IU99 346 aa14.48□□□□□ -0.09
CHCHD3-203ENST00000448878 NDNFQ8TB73 568 aa14.48□□□□□ -0.09
CHCHD3-203ENST00000448878 CAPSLQ8WWF8 208 aa14.48□□□□□ -0.09
CHCHD3-203ENST00000448878 OR5B21A6NL26 309 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 TK1P04183 234 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 HAAOP46952 286 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 HMGA2P52926 109 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 EDDM3BP56851 147 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 ASCC1Q8N9N2 400 aaKnown RBP14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 POC1AQ8NBT0 407 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 OTOSQ8NHW6 89 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 NIPAL2Q9H841 368 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 CMC2Q9NRP2 79 aa14.47□□□□□ -0.09
CHCHD3-203ENST00000448878 C17orf98A8MV24 154 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 ARPC2O15144 300 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 PSMA6P60900 246 aaKnown RBP14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 RIPPLY1Q0D2K3 151 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 LDLRAD2Q5SZI1 272 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 ZNF626Q68DY1 528 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 LCN8Q6JVE9 175 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 IQCF1Q8N6M8 205 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 OR4X2Q8NGF9 303 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 TEX47Q8TBZ9 253 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 MYDGFQ969H8 173 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 B9D2Q9BPU9 175 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 ARGLU1Q9NWB6 273 aaPredicted RBP14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 PIGLQ9Y2B2 252 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 U3KQV3 271 aa14.46□□□□□ -0.09
CHCHD3-203ENST00000448878 ODF3BA8MYP8 253 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 H3BN98 237 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 PSMD9O00233 223 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 NRASP01111 189 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 ZNF728P0DKX0 622 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 ZNF684Q5T5D7 378 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 ZNF770Q6IQ21 691 aaPredicted RBP14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 GDPD3Q7L5L3 318 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 ZNF454Q8N9F8 522 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 OR11H6Q8NGC7 330 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 STMN2Q93045 179 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 OR8B4Q96RC9 309 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 INPP5EQ9NRR6 644 aa14.45□□□□□ -0.1
CHCHD3-203ENST00000448878 TMEM269A0A1B0GVZ9 245 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 PRR23D1E9PI22 279 aaPredicted RBP14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 LPLP06858 475 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 PRR23D2P0DMB1 279 aaPredicted RBP14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 IGHV1-8P0DP01 117 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 HSD17B1P14061 328 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 DLX6P56179 175 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 RPS7P62081 194 aaKnown RBP14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 ESRRGP62508 458 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 ACTA2P62736 377 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 ACTG2P63267 376 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 ACTC1P68032 377 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 ACTA1P68133 377 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 TCTEX1D4Q5JR98 221 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 ASRGL1Q7L266 308 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 PIGWQ7Z7B1 504 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 ZNF573Q86YE8 665 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 OR51E1Q8TCB6 317 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 CDRT15Q96T59 188 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 CHID1Q9BWS9 393 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 ENPP5Q9UJA9 477 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 LAMP5Q9UJQ1 280 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 SLC22A13Q9Y226 551 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 POLDIP2Q9Y2S7 368 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 KLHDC2Q9Y2U9 406 aa14.44□□□□□ -0.1
CHCHD3-203ENST00000448878 J3QT63 122 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 CCDC159P0C7I6 412 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 PGA5P0DJD9 388 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 CD24P25063 80 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 AZGP1P25311 298 aaKnown RBP14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 DYNLT3P51808 116 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 HCCSP53701 268 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 COL10A1Q03692 680 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 ABCA11PQ4W5N1 156 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 C9orf152Q5JTZ5 239 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 PLBD1Q6P4A8 553 aa14.43□□□□□ -0.1
CHCHD3-203ENST00000448878 CYP2R1Q6VVX0 501 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms