RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 NR2C2APQ86WQ0 139 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 EXTL1Q92935 676 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 NAA60Q9H7X0 242 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 C19orf12Q9NSK7 152 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 C4orf47A7E2U8 309 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 PNPP00491 289 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 ZFP62Q8NB50 900 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-206ENST00000445265 LIN37Q96GY3 246 aaPredicted RBP14.73□□□□□ -0.05
TCOF1-206ENST00000445265 BTF3L4Q96K17 158 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 GFOD1Q9NXC2 390 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 BAXQ07812 192 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 HLA-BQ31612 363 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 MIDNQ504T8 468 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 MRPS24Q96EL2 167 aaKnown RBP14.73□□□□□ -0.05
TCOF1-206ENST00000445265 GNG12Q9UBI6 72 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 FBXL17Q9UF56 701 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 PTPRDP23468 1912 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 A0A096LPE4 126 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 A0A1W2PPZ6 126 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 NPIPB9F8W1W9 429 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 LINC01387J3KSC0 135 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 IL9P15248 144 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 PSMB3P49720 205 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 MAGT1Q9H0U3 335 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 LANCL2Q9NS86 450 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 URGCP-MRPS24S4R325 110 aa14.73□□□□□ -0.05
TCOF1-206ENST00000445265 PDCD6O75340 191 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 ISG15P05161 165 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 CBR1P16152 277 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 TRA2AQ13595 282 aaKnown RBP eCLIP14.72□□□□□ -0.051e-7■■■■■ 31.7
TCOF1-206ENST00000445265 ZNF660Q6AZW8 331 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-206ENST00000445265 RPL7L1Q6DKI1 246 aaKnown RBP14.72□□□□□ -0.05
TCOF1-206ENST00000445265 TMEM178AQ8NBL3 297 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 UQCC1Q9NVA1 299 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 ANXA10Q9UJ72 324 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 LSRQ86X29 649 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-206ENST00000445265 OR2AE1Q8NHA4 323 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 TMEM100Q9NV29 134 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 AQP7P3A6NL99 342 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 EPHA8P29322 1005 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-206ENST00000445265 EIF2S3LQ2VIR3 472 aaKnown RBP14.72□□□□□ -0.05
TCOF1-206ENST00000445265 C1orf87Q8N0U7 546 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 APOBEC3DQ96AK3 386 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-206ENST00000445265 GPR160Q9UJ42 338 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 CASP8AP2Q9UKL3 1982 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 A0A1B0GTQ1 180 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 TIMM8AO60220 97 aaPredicted RBP14.72□□□□□ -0.05
TCOF1-206ENST00000445265 SERPINA7P05543 415 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 ZNF32P17041 273 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 NFYBP25208 207 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 RRADP55042 308 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 ZNF774Q6NX45 483 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 SMRP1Q8NCR6 262 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 RAB39BQ96DA2 213 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 EDEM2Q9BV94 578 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 RAB33BQ9H082 229 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 OPA3Q9H6K4 179 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 C12orf49Q9H741 205 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 WNT16Q9UBV4 365 aa14.72□□□□□ -0.05
TCOF1-206ENST00000445265 IL13RA2Q14627 380 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 TEX30Q5JUR7 227 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 DMBX1Q8NFW5 382 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 MRPL22Q9NWU5 206 aaKnown RBP14.71□□□□□ -0.05
TCOF1-206ENST00000445265 FAM96BQ9Y3D0 163 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 PGA3P0DJD8 388 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 KCNJ3P48549 501 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 ZNF239Q16600 458 aaKnown RBP14.71□□□□□ -0.05
TCOF1-206ENST00000445265 CST9LP1Q5W188 147 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 ADAD2Q8NCV1 583 aaKnown RBP14.71□□□□□ -0.05
TCOF1-206ENST00000445265 ADIPOR1Q96A54 375 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 WDR1O75083 606 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 OR2B8PP59922 312 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 ARF1P84077 181 aaKnown RBP14.71□□□□□ -0.05
TCOF1-206ENST00000445265 NHLRC3Q5JS37 347 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 OR8G2PQ6IF36 304 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 GNG13Q9P2W3 67 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 LPAR3Q9UBY5 353 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 DOCK6Q96HP0 2047 aa14.71□□□□□ -0.05
TCOF1-206ENST00000445265 J3QRE1 110 aa14.71□□□□□ -0.06
TCOF1-206ENST00000445265 HLA-HP01893 362 aa14.71□□□□□ -0.06
TCOF1-206ENST00000445265 PTAFRP25105 342 aa14.71□□□□□ -0.06
TCOF1-206ENST00000445265 DEFA6Q01524 100 aa14.71□□□□□ -0.06
TCOF1-206ENST00000445265 LINC00114Q6XXX2 140 aa14.71□□□□□ -0.06
TCOF1-206ENST00000445265 SSX3Q99909 188 aa14.71□□□□□ -0.06
TCOF1-206ENST00000445265 MS4A7Q9GZW8 240 aaPredicted RBP14.71□□□□□ -0.06
TCOF1-206ENST00000445265 LIN7CQ9NUP9 197 aaKnown RBP14.71□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF732B4DXR9 585 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 TERTO14746 1132 aaKnown RBP14.7□□□□□ -0.06
TCOF1-206ENST00000445265 CTSBP07858 339 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 H2BFSP57053 126 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 TMEM33P57088 247 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 RPS11P62280 158 aaKnown RBP eCLIP14.7□□□□□ -0.06
TCOF1-206ENST00000445265 NAAAQ02083 359 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 ADIRFQ15847 76 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 ZNF260Q3ZCT1 412 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 TMEM74BQ9NUR3 256 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 MTCL1Q9Y4B5 1905 aaKnown RBP14.7□□□□□ -0.06
TCOF1-206ENST00000445265 OR2M5A3KFT3 312 aa14.7□□□□□ -0.06
TCOF1-206ENST00000445265 KLF13Q9Y2Y9 288 aaPredicted RBP14.7□□□□□ -0.06
TCOF1-206ENST00000445265 TESK1Q15569 626 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms