RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 TEX261Q6UWH6 196 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 LHFPL2Q6ZUX7 228 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 CITED4Q96RK1 184 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 GHRLQ9UBU3 117 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 SLC7A11Q9UPY5 501 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 KCNK7Q9Y2U2 307 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 U3KQ87 197 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 A0A1B0GUH1 482 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 CD3DP04234 171 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 TIMP3P35625 211 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 FUT6P51993 359 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 UCNP55089 124 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 ERVS71-1P61550 626 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 PRDX4Q13162 271 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 C1orf162Q8NEQ5 155 aaPredicted RBP18.17■□□□□ 0.5
PTPRF-207ENST00000436724 OR51T1Q8NGJ9 327 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 OR4C16Q8NGL9 310 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 SEC22CQ9BRL7 303 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 FGF23Q9GZV9 251 aaPredicted RBP18.17■□□□□ 0.5
PTPRF-207ENST00000436724 ASF1BQ9NVP2 202 aa18.17■□□□□ 0.5
PTPRF-207ENST00000436724 CD300LBA8K4G0 201 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 C1QTNF9BB2RNN3 333 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 ICMTO60725 284 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 CSF1P09603 554 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 C1QTNF9P0C862 333 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 METTL11BQ5VVY1 283 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 ZNF474Q6S9Z5 364 aaPredicted RBP18.16■□□□□ 0.5
PTPRF-207ENST00000436724 FJX1Q86VR8 437 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 DOLPP1Q86YN1 238 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 CALHM1Q8IU99 346 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 RAB3CQ96E17 227 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 TINAGQ9UJW2 476 aa18.16■□□□□ 0.5
PTPRF-207ENST00000436724 IGKV1-12A0A0C4DH73 117 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 SULT1C2O00338 296 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 IGKV1D-12P01611 117 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 CHRM2P08172 466 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 GLDNQ6ZMI3 551 aaPredicted RBP18.15■□□□□ 0.5
PTPRF-207ENST00000436724 GVQW1Q8N7I0 195 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 ZNF680Q8NEM1 530 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 HPSE2Q8WWQ2 592 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 ARHGAP5-AS1Q96IT6 56 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 URM1Q9BTM9 101 aaKnown RBP18.15■□□□□ 0.5
PTPRF-207ENST00000436724 SCPEP1Q9HB40 452 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 CDH20Q9HBT6 801 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 SH3BGRL2Q9UJC5 107 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 SMPD2O60906 423 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 IGKV3-15P01624 115 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 CRHP06850 196 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 GLI4P10075 376 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 OR3A3P47888 321 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 OR2T2Q6IF00 324 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 GFRALQ6UXV0 394 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 BEND4Q6ZU67 534 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 TRAPPC6BQ86SZ2 158 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 BATF2Q8N1L9 274 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 OR4S1Q8NGB4 309 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 TAS2R8Q9NYW2 309 aa18.15■□□□□ 0.5
PTPRF-207ENST00000436724 SCGNO76038 276 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 HTR3BO95264 441 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 MELTFP08582 738 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 CBR1P16152 277 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 ATP1B3P54709 279 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 ACTBP60709 375 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 ACTG1P63261 375 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 P2RY6Q15077 328 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 RSU1Q15404 277 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 BHLHA15Q7RTS1 189 aaPredicted RBP18.14■□□□□ 0.49
PTPRF-207ENST00000436724 FAM89BQ8N5H3 189 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 OR56B1Q8NGI3 324 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 OR2T35Q8NGX2 323 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 BOD1Q96IK1 185 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 OR2J1Q9GZK6 312 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 SPTA1P02549 2419 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 SLC22A5O76082 557 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 NDUFB6O95139 128 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 HOXB1P14653 301 aaPredicted RBP18.14■□□□□ 0.49
PTPRF-207ENST00000436724 HIST1H1DP16402 221 aaKnown RBP18.14■□□□□ 0.49
PTPRF-207ENST00000436724 CEACAM8P31997 349 aaPredicted RBP18.14■□□□□ 0.49
PTPRF-207ENST00000436724 MECP2P51608 486 aaKnown RBP18.14■□□□□ 0.49
PTPRF-207ENST00000436724 GPM6AP51674 278 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 OR5L1Q8NGL2 311 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 MED30Q96HR3 178 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 METTL9Q9H1A3 318 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 ZNF581Q9P0T4 197 aa18.14■□□□□ 0.49
PTPRF-207ENST00000436724 PRRG2O14669 202 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 SSX5O60225 188 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 NOS1APO75052 506 aaPredicted RBP18.13■□□□□ 0.49
PTPRF-207ENST00000436724 ANXA7P20073 488 aaKnown RBP18.13■□□□□ 0.49
PTPRF-207ENST00000436724 GABRR1P24046 479 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 SSTR2P30874 369 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 PDZK1IP1Q13113 114 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 STEAP1BQ6NZ63 245 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 CPNE2Q96FN4 548 aaPredicted RBP18.13■□□□□ 0.49
PTPRF-207ENST00000436724 NUDT16L1Q9BRJ7 211 aaKnown RBP18.13■□□□□ 0.49
PTPRF-207ENST00000436724 PIPOXQ9P0Z9 390 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 EIF3KQ9UBQ5 218 aaKnown RBP18.13■□□□□ 0.49
PTPRF-207ENST00000436724 M0QYG6 137 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 CST4P01036 141 aa18.13■□□□□ 0.49
PTPRF-207ENST00000436724 CSTBP04080 98 aaKnown RBP18.13■□□□□ 0.49
PTPRF-207ENST00000436724 SFTPBP07988 381 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms