RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 ZDHHC22Q8N966 263 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 LY6G5BQ8NDX9 201 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 C10orf35Q96D05 121 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 MRPL48Q96GC5 212 aaKnown RBP16.79■□□□□ 0.28
GTF3A-202ENST00000419181 MED30Q96HR3 178 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 WDFY2Q96P53 400 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 TBX15Q96SF7 602 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF649Q9BS31 505 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 PCGF1Q9BSM1 259 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 ALG8Q9BVK2 526 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 MS4A7Q9GZW8 240 aaPredicted RBP16.79■□□□□ 0.28
GTF3A-202ENST00000419181 SIRPDQ9H106 197 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 INPP5EQ9NRR6 644 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 RASL12Q9NYN1 266 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 POLDIP2Q9Y2S7 368 aa16.79■□□□□ 0.28
GTF3A-202ENST00000419181 RPL36Q9Y3U8 105 aaKnown RBP16.79■□□□□ 0.28
GTF3A-202ENST00000419181 TRIM77I1YAP6 450 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 J3QLW9 94 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 NOS1APO75052 506 aaPredicted RBP16.78■□□□□ 0.28
GTF3A-202ENST00000419181 WBP4O75554 376 aaKnown RBP16.78■□□□□ 0.28
GTF3A-202ENST00000419181 TOX4O94842 621 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 HTR1AP08908 422 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 ACAA1P09110 424 aaPredicted RBP16.78■□□□□ 0.28
GTF3A-202ENST00000419181 PSG2P11465 335 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF19P17023 458 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 CCR9P51686 369 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 DGUOKQ16854 277 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 TMEM244Q5VVB8 128 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 ACP7Q6ZNF0 438 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 LHFPL3Q86UP9 236 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 CALHM1Q8IU99 346 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 EGFL6Q8IUX8 553 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 SYS1Q8N2H4 156 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 DMRTB1Q96MA1 342 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF488Q96MN9 340 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF48Q96MX3 618 aaPredicted RBP16.78■□□□□ 0.28
GTF3A-202ENST00000419181 MYCBPQ99417 103 aaPredicted RBP16.78■□□□□ 0.28
GTF3A-202ENST00000419181 NRIP2Q9BQI9 281 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 ERVK13-1Q9NX77 482 aa16.78■□□□□ 0.28
GTF3A-202ENST00000419181 FBN3Q75N90 2809 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 ANKRD65E5RJM6 399 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 GATBO75879 557 aaKnown RBP16.77■□□□□ 0.28
GTF3A-202ENST00000419181 SMN1Q16637 294 aaKnown RBP16.77■□□□□ 0.28
GTF3A-202ENST00000419181 SMIM21Q3B7S5 101 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 ZNF691Q5VV52 312 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 METTL11BQ5VVY1 283 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 RBMS3Q6XE24 437 aaKnown RBP16.77■□□□□ 0.28
GTF3A-202ENST00000419181 OR52I1Q8NGK6 324 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 C8orf46Q8TAG6 207 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 TRMT10AQ8TBZ6 339 aaKnown RBP16.77■□□□□ 0.28
GTF3A-202ENST00000419181 NPRL2Q8WTW4 380 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 FAM216AQ8WUB2 273 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 PP6455Q8WZ26 134 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 DCTN5Q9BTE1 182 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 PKIBQ9C010 78 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 CNTD2Q9H8S5 307 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 ISG20L2Q9H9L3 353 aaKnown RBP16.77■□□□□ 0.28
GTF3A-202ENST00000419181 SLC25A10Q9UBX3 287 aaPredicted RBP16.77■□□□□ 0.28
GTF3A-202ENST00000419181 SLC7A11Q9UPY5 501 aa16.77■□□□□ 0.28
GTF3A-202ENST00000419181 FAM230AA0A1W2PPH8 454 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 OR4C45A6NMZ5 311 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 CLIC3O95833 236 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 GABRA2P47869 451 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 CAV3P56539 151 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 ARF6P62330 175 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 IL24Q13007 206 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 KLHL22Q53GT1 634 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 GPR157Q5UAW9 335 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 BRD3OSQ6XYD6 125 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 ANGPTL5Q86XS5 388 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 ADAT3Q96EY9 351 aaPredicted RBP16.76■□□□□ 0.27
GTF3A-202ENST00000419181 SDSLQ96GA7 329 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 HES4Q9HCC6 221 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 MAB21L2Q9Y586 359 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 SOX21Q9Y651 276 aaPredicted RBP16.76■□□□□ 0.27
GTF3A-202ENST00000419181 KPTNQ9Y664 436 aa16.76■□□□□ 0.27
GTF3A-202ENST00000419181 TENM1Q9UKZ4 2725 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 IGKV1-27A0A075B6S5 117 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 SERPINA3P01011 423 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 FUT6P51993 359 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 BPIFB3P59826 476 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 ERVK11-1P61568 191 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 UBA52P62987 128 aaKnown RBP16.75■□□□□ 0.27
GTF3A-202ENST00000419181 ALKBH1Q13686 389 aaKnown RBP16.75■□□□□ 0.27
GTF3A-202ENST00000419181 TTC23Q5W5X9 447 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 ZNRF1Q8ND25 227 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 OR10AC1Q8NH08 325 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 CYGBQ8WWM9 190 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 C1orf147Q96MC9 270 aaPredicted RBP16.75■□□□□ 0.27
GTF3A-202ENST00000419181 JAM3Q9BX67 310 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 HHLA2Q9UM44 414 aa16.75■□□□□ 0.27
GTF3A-202ENST00000419181 CENPVL3A0A0U1RRI6 287 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 RFPL4AA6NLU0 287 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 RFPL4AL1F8VTS6 287 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 CASQ2O14958 399 aaPredicted RBP16.74■□□□□ 0.27
GTF3A-202ENST00000419181 NXPH2O95156 264 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 LIMS3P0CW19 117 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 LIMS4P0CW20 117 aa16.74■□□□□ 0.27
GTF3A-202ENST00000419181 ADARB1P78563 741 aaKnown RBP16.74■□□□□ 0.27
GTF3A-202ENST00000419181 PDCD1Q15116 288 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms