RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CCDC107Q8WV48 283 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 SNAPC3Q92966 411 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 ABHD17AQ96GS6 310 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 HIST1H2AAQ96QV6 131 aa16.33■□□□□ 0.2
USP39-202ENST00000409025 ALX4Q9H161 411 aaPredicted RBP16.33■□□□□ 0.2
USP39-202ENST00000409025 UBE2QL1A1L167 161 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 ANKRD30BLA7E2S9 258 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 WDR1O75083 606 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 TNFSF13O75888 250 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 TPOP07202 933 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 CELA3BP08861 270 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 PTGER4P35408 488 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 TSC22D1Q15714 1073 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 KRTCAP3Q53RY4 240 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 NKAPLQ5M9Q1 402 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 FAM180AQ6UWF9 173 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 ZNF611Q8N823 705 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 CAPSLQ8WWF8 208 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 FBXW5Q969U6 566 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 WASF3Q9UPY6 502 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 MSRB2Q9Y3D2 182 aa16.32■□□□□ 0.2
USP39-202ENST00000409025 SMLR1H3BR10 107 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 AKR7A2O43488 359 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 PMP2P02689 132 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 TAF9Q16594 264 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 SEM1Q6ZVN7 128 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 C6orf201Q7Z4U5 140 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 CALHM1Q8IU99 346 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 OR13C8Q8NGS7 320 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 STARD4Q96DR4 205 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 CRIM1Q9NZV1 1036 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 PAIP2BQ9ULR5 123 aaKnown RBP16.31■□□□□ 0.2
USP39-202ENST00000409025 HSF4Q9ULV5 492 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 FIGNL2A6NMB9 653 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 FABP7O15540 132 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 CRHP06850 196 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 CBR1P16152 277 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 GPM6AP51674 278 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 SLC25A26Q70HW3 274 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 MYPOPQ86VE0 399 aaPredicted RBP16.31■□□□□ 0.2
USP39-202ENST00000409025 HOGA1Q86XE5 327 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 SPICQ8N5J4 248 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 ZNF610Q8N9Z0 462 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 OR5A2Q8NGI9 324 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 OR52B4Q8NGK2 314 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 HPSE2Q8WWQ2 592 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 ZNF436Q9C0F3 470 aaPredicted RBP16.31■□□□□ 0.2
USP39-202ENST00000409025 MPC1Q9Y5U8 109 aa16.31■□□□□ 0.2
USP39-202ENST00000409025 CGAP01215 116 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 AMY2BP19961 511 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 IL32P24001 234 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 MICBQ29980 383 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 EIF2S3LQ2VIR3 472 aaKnown RBP16.3■□□□□ 0.2
USP39-202ENST00000409025 C4orf46Q504U0 113 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 C1orf185Q5T7R7 199 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 FBXL14Q8N1E6 418 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 BHLHE23Q8NDY6 225 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 CYYR1Q96J86 154 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 HYLS1Q96M11 299 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 ST6GALNAC5Q9BVH7 336 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 CHST6Q9GZX3 395 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 OPN3Q9H1Y3 402 aaPredicted RBP16.3■□□□□ 0.2
USP39-202ENST00000409025 MYOZ1Q9NP98 299 aaPredicted RBP16.3■□□□□ 0.2
USP39-202ENST00000409025 MGAT4CQ9UBM8 478 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 ZNF629Q9UEG4 869 aaPredicted RBP16.3■□□□□ 0.2
USP39-202ENST00000409025 TP53TG5Q9Y2B4 290 aa16.3■□□□□ 0.2
USP39-202ENST00000409025 ZNF732B4DXR9 585 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 SMPD2O60906 423 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 SFTPBP07988 381 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 HAAOP46952 286 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 P2RY6Q15077 328 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 VAX1Q5SQQ9 334 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 ATPAF1Q5TC12 328 aaPredicted RBP16.29■□□□□ 0.2
USP39-202ENST00000409025 SIGIRRQ6IA17 410 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 SEZ6L2Q6UXD5 910 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 TMED4Q7Z7H5 227 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 CXorf67Q86X51 503 aaPredicted RBP16.29■□□□□ 0.2
USP39-202ENST00000409025 SAXO1Q8IYX7 474 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 C17orf78Q8N4C9 275 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 WDR31Q8NA23 367 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 OR5H2Q8NGV7 314 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 FGF23Q9GZV9 251 aaPredicted RBP16.29■□□□□ 0.2
USP39-202ENST00000409025 RANBP3Q9H6Z4 567 aaPredicted RBP16.29■□□□□ 0.2
USP39-202ENST00000409025 ST3GAL6Q9Y274 331 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 NPTNQ9Y639 398 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 GTF3C1Q12789 2109 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 ZFHX4Q86UP3 3567 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 K7ENP7 123 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 PPP1CBP62140 327 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 TBR1Q16650 682 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 PIGYQ3MUY2 71 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 SPATA46Q5T0L3 261 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 OR2T2Q6IF00 324 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 FBXW12Q6X9E4 464 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 BEND4Q6ZU67 534 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 ZDHHC22Q8N966 263 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 OR5P3Q8WZ94 311 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 EMG1Q92979 244 aaKnown RBP16.29■□□□□ 0.2
USP39-202ENST00000409025 POM121Q96HA1 1249 aa16.29■□□□□ 0.2
USP39-202ENST00000409025 AKAP13Q12802 2813 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms