RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ATP23Q9Y6H3 246 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ABCA3Q99758 1704 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 H0Y980 276 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 GUK1Q16774 197 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 LHX4Q969G2 390 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 MMP23AO75900 390 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 FBXL14Q8N1E6 418 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 A0A0A6YYC8 382 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 I3L1I5 382 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 QDPRP09417 244 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 GJA5P36382 358 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 OR1L4Q8NGR5 311 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZCCHC10Q8TBK6 192 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 FAM210BQ96KR6 192 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF883P0CG24 379 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 IL21RQ9HBE5 538 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 LAMB4A4D0S4 1761 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 EIF4EP06730 217 aaKnown RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ITGA3P26006 1051 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ADIRFQ15847 76 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 POM121L2Q96KW2 1035 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 F2RP25116 425 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 PNKDQ8N490 385 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 SMIM7Q9BQ49 75 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 A0A1B0GTI1 187 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 WNT2P09544 360 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 IFITM3Q01628 133 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF154Q13106 437 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 C1orf162Q8NEQ5 155 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 PTPMT1Q8WUK0 201 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM30CPA0ZSE6 113 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 RAET1LQ5VY80 246 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF649Q9BS31 505 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 CBX7O95931 251 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 RPS18P62269 152 aaKnown RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 POU3F1Q03052 451 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 PIGLQ9Y2B2 252 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF729A6NN14 1252 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 OR10AG1Q8NH19 301 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ARFGEF2Q9Y6D5 1785 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM183BQ1AE95 376 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 RNASEH2CQ8TDP1 164 aaKnown RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 NKD1Q969G9 470 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 RNF5Q99942 180 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 SLC6A13Q9NSD5 602 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 CEACAM21Q3KPI0 293 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 MEGF10Q96KG7 1140 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 TRAF3IP2O43734 574 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 PQLC2Q6ZP29 291 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 COX15Q7KZN9 410 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZFP64Q9NPA5 681 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 NWD2Q9ULI1 1742 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 HCRTO43612 131 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 CCL1P22362 96 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF658BQ4V348 819 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 OR8G2PQ6IF36 304 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 LIN37Q96GY3 246 aaPredicted RBP4.38□□□□□ -1.71
PCDH9-201ENST00000377861 BET1LQ9NYM9 111 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 MYH10P35580 1976 aa4.38□□□□□ -1.71
PCDH9-201ENST00000377861 IGLV3-12A0A075B6K2 115 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 TCAPO15273 167 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ZGLP1P0C6A0 271 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 BIDP55957 195 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 WSB2Q9NYS7 404 aaPredicted RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 COA3Q9Y2R0 106 aaPredicted RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 COL5A1-AS1Q5SY13 56 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 SYNPO2LQ9H987 977 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 A0A1W2PPV9 198 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 FBXO45P0C2W1 286 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 RPL7L1Q6DKI1 246 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PUSL1Q8N0Z8 303 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 LINC01599Q8WXQ3 324 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 SARAFQ96BY9 339 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ACKR4Q9NPB9 350 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PRNDQ9UKY0 176 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 TBL2Q9Y4P3 447 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 STARD6P59095 220 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 C14orf79Q96F83 325 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 TMEM147Q9BVK8 224 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 OR7A5Q15622 319 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CLEC18BQ6UXF7 455 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 OR2V1Q8NHB1 315 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 TSACCQ96A04 125 aaPredicted RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 IL19Q9UHD0 177 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 TRBV6-6A0A0A6YYG2 114 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ZNF768Q9H5H4 540 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ASF1BQ9NVP2 202 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 ETHE1O95571 254 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 GHRHP01286 108 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CT45A6P0DMU7 189 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CT45A5P0DMU8 189 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CT45A7P0DMV0 189 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 PPIAP62937 165 aaKnown RBP4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CT45A1Q5HYN5 189 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 CT45A3Q8NHU0 189 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 MS4A3Q96HJ5 214 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 OR51I2Q9H344 312 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 LRP12Q9Y561 859 aa4.37□□□□□ -1.71
PCDH9-201ENST00000377861 SDCBPO00560 298 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms