RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 PLEKHF2Q9H8W4 249 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 LHFPL6Q9Y693 200 aa12.75□□□□□ -0.37
TCOF1-202ENST00000377797 OR5H14A6NHG9 310 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 LANCL1O43813 399 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 LYPD3O95274 346 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 TEX30Q5JUR7 227 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 GPR157Q5UAW9 335 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 LYG2Q86SG7 212 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 SLC51BQ86UW2 128 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 DMBX1Q8NFW5 382 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 NDRG3Q9UGV2 375 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 PCDHGA9Q9Y5G4 932 aaKnown RBP12.74□□□□□ -0.37
TCOF1-202ENST00000377797 CTDSPLO15194 276 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 PIN1P1O15428 100 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 SOCS1O15524 211 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 IL5P05113 134 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF362Q5T0B9 420 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-202ENST00000377797 MAP6Q96JE9 813 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 SAV1Q9H4B6 383 aaPredicted RBP12.74□□□□□ -0.37
TCOF1-202ENST00000377797 LOC102723996A0A087X1L8 192 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 TRBV5-5A0A0J9YX44 114 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 VSIG8P0DPA2 414 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 RAG2P55895 527 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 RPL19P84098 196 aaKnown RBP12.74□□□□□ -0.37
TCOF1-202ENST00000377797 RHEBQ15382 184 aa12.74□□□□□ -0.37
TCOF1-202ENST00000377797 NKX6-3A6NJ46 265 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 MSTNO14793 375 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 PIGPP57054 158 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 ST3GAL2Q16842 350 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 NAA40Q86UY6 237 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 OR2Z1Q8NG97 314 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 LILRB4Q8NHJ6 448 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 TP53TG5Q9Y2B4 290 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 KLF7O75840 302 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-202ENST00000377797 PSG4Q00888 419 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 FNDC7Q5VTL7 733 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 SRXN1Q9BYN0 137 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 CHST6Q9GZX3 395 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 NPIPB13A6NJU9 1138 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 C9orf172C9J069 976 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 NPIPB4C9JG80 1138 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 SPRY3O43610 288 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 GSTZ1O43708 216 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-202ENST00000377797 PDCD6O75340 191 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF14P17017 642 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-202ENST00000377797 LUMP51884 338 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-202ENST00000377797 TMEM128Q5BJH2 165 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 NUFIP2Q7Z417 695 aaKnown RBP12.73□□□□□ -0.37
TCOF1-202ENST00000377797 ST8SIA4Q92187 359 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 S100PBPQ96BU1 408 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 C10orf35Q96D05 121 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 RGS11O94810 467 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 FAM58AQ8N1B3 248 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 OR13G1Q8NGZ3 307 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 POC1BQ8TC44 478 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 GMPPAQ96IJ6 420 aaPredicted RBP12.73□□□□□ -0.37
TCOF1-202ENST00000377797 SIGLEC12Q96PQ1 595 aa12.73□□□□□ -0.37
TCOF1-202ENST00000377797 SMIM21Q3B7S5 101 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 CISD2Q8N5K1 135 aaKnown RBP12.72□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF441Q8N8Z8 693 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 ZBTB44Q8NCP5 570 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 CHST5Q9GZS9 411 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 TNFSF12O43508 249 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 PSMB6P28072 239 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 PTGER4P35408 488 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 PLGLAQ15195 96 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 UBALD1Q8TB05 177 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 PBDC1Q9BVG4 233 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 ST8SIA3O43173 380 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 AKR7A2O43488 359 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 SKA3Q8IX90 412 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 PRELID3BQ9Y3B1 194 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 MPC1Q9Y5U8 109 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 OR5B21A6NL26 309 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 NXPH3O95157 252 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 TGM6O95932 706 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 BLOC1S1P78537 153 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 COL19A1Q14993 1142 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 TMUB2Q71RG4 321 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 TCTE3Q8IZS6 198 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 PLSCR3Q9NRY6 295 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 CSAG2Q9Y5P2 127 aa12.72□□□□□ -0.37
TCOF1-202ENST00000377797 CD59P13987 128 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 Q8IYB0 196 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 ZNF808Q8N4W9 903 aaPredicted RBP12.71□□□□□ -0.37
TCOF1-202ENST00000377797 BOD1Q96IK1 185 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 HRH4Q9H3N8 390 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 PPP1R3CQ9UQK1 317 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 GPX8Q8TED1 209 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 SLC39A7Q92504 469 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 MRPS24Q96EL2 167 aaKnown RBP12.71□□□□□ -0.37
TCOF1-202ENST00000377797 SULT4A1Q9BR01 284 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 ZIC3O60481 467 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 CLINT1Q14677 625 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 LRRC75AQ8NAA5 344 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 TCTEX1D2Q8WW35 142 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 SEMA5BQ9P283 1151 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 ZFHX2Q9C0A1 2572 aaPredicted RBP12.71□□□□□ -0.37
TCOF1-202ENST00000377797 SCN8AQ9UQD0 1980 aa12.71□□□□□ -0.37
TCOF1-202ENST00000377797 SHISA3A0PJX4 238 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms