RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 DTYMKP23919 212 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 CD300CQ08708 224 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 GGTLC2Q14390 218 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 RTL8BQ17RB0 113 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 ACOT6Q3I5F7 207 aaPredicted RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 RGS7BPQ6MZT1 257 aaPredicted RBP10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 DEFB108BQ8NET1 73 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 OR8B12Q8NGG6 310 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 TMEM231Q9H6L2 316 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 PPP1R3EQ9H7J1 279 aa10.53□□□□□ -0.72
DEPDC1-201ENST00000370966 PRSS44E7EML9 344 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 DNPH1O43598 174 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 CYC1P08574 325 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 DEFB109BQ30KR1 87 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 OR2B11Q5JQS5 317 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 OR5M8Q8NGP6 311 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 RNF133Q8WVZ7 376 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 TIMD4Q96H15 378 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 PTPRFP10586 1907 aa10.52□□□□□ -0.72
DEPDC1-201ENST00000370966 ALPK2Q86TB3 2170 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 OR5B21A6NL26 309 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 OR3A4PP47883 348 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 AGFG1P52594 562 aaKnown RBP10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 NDUFA6P56556 154 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 C1orf210Q8IVY1 113 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 ASB5Q8WWX0 329 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 PATZ1Q9HBE1 687 aaKnown RBP10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 RHOFQ9HBH0 211 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 URGCP-MRPS24S4R325 110 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 CENPVL1A0A0U1RR11 272 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 CLEC18AA5D8T8 446 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 OR5H15A6NDH6 313 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 CRYABP02511 175 aaKnown RBP10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 SULT1A3P0DMM9 295 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 SULT1A4P0DMN0 295 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 TAS2R45P59539 299 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 ENDOGQ14249 297 aaKnown RBP10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 ZNF766Q5HY98 468 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 ZNF787Q6DD87 383 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 DHRS13Q6UX07 377 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 C6orf201Q7Z4U5 140 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 SPRED2Q7Z698 418 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 FAM58AQ8N1B3 248 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 ZFP62Q8NB50 900 aaPredicted RBP10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 CLEC18CQ8NCF0 446 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 PLA2G3Q9NZ20 509 aa10.52□□□□□ -0.73
DEPDC1-201ENST00000370966 RGS13O14921 159 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 SCO1O75880 301 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 LY86O95711 162 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 SP6Q3SY56 376 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 PRSS54Q6PEW0 395 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 NUFIP2Q7Z417 695 aaKnown RBP10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 LRRTM1Q86UE6 522 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 FAAP24Q9BTP7 215 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 RYDENQ9NUL5 291 aaKnown RBP10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 ST6GALNAC2Q9UJ37 374 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 RCL1Q9Y2P8 373 aaKnown RBP10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 ATP23Q9Y6H3 246 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 GALR2O43603 387 aaPredicted RBP10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 INHBBP09529 407 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 ZP3P21754 424 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 PRDX4Q13162 271 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 ZXDCQ2QGD7 858 aaPredicted RBP10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 TMEM123Q8N131 208 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 CMTM2Q8TAZ6 248 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 CLDN23Q96B33 292 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 COMMD5Q9GZQ3 224 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 GAB2Q9UQC2 676 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 TMEM265A0A087WTH1 108 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 HPP00738 406 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 IAPPP10997 89 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 IFITM3Q01628 133 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 SSX2Q16385 188 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 GAB4Q2WGN9 574 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 SSX9Q7RTT3 188 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 C9orf40Q8IXQ3 194 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 OR8U1Q8NH10 309 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 WDR54Q9H977 334 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 FN3KRPQ9HA64 309 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 OCIAD1Q9NX40 245 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 RASL12Q9NYN1 266 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 DTX4Q9Y2E6 619 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 SVILO95425 2214 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 M0R1B8 84 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 ADAM10O14672 748 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 ABCD4O14678 606 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 ADH4P08319 380 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 CBR1P16152 277 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 DEFA6Q01524 100 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 SLC26A10Q8NG04 563 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 SCMH1Q96GD3 660 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 GPR87Q9BY21 358 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 TUBG2Q9NRH3 451 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 MPC1Q9Y5U8 109 aa10.51□□□□□ -0.73
DEPDC1-201ENST00000370966 KCNJ3P48549 501 aa10.5□□□□□ -0.73
DEPDC1-201ENST00000370966 DMWDQ09019 674 aa10.5□□□□□ -0.73
DEPDC1-201ENST00000370966 PJVKQ0ZLH3 352 aa10.5□□□□□ -0.73
DEPDC1-201ENST00000370966 SRSF5Q13243 272 aaKnown RBP10.5□□□□□ -0.73
DEPDC1-201ENST00000370966 KLF9Q13886 244 aaPredicted RBP10.5□□□□□ -0.73
DEPDC1-201ENST00000370966 SPATA46Q5T0L3 261 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms