RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 LOC107986453A0A1B0GWG9 222 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 FAM74A7A6NL05 159 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 ATXN7O15265 892 aaPredicted RBP11.05□□□□□ -0.64
DDX39A-202ENST00000324340 SLC2A1P11166 492 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 ANOS1P23352 680 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 SWI5Q1ZZU3 235 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 ODF4Q2M2E3 257 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 FAM74A3Q4VXF1 159 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 UBE2NLQ5JXB2 153 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 COLCA1Q6ZS62 124 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 FAM57BQ71RH2 274 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 MDP1Q86V88 176 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 WDR31Q8NA23 367 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 PLPP7Q8NBV4 271 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 GLYATL2Q8WU03 294 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 PCNPQ8WW12 178 aaKnown RBP11.05□□□□□ -0.64
DDX39A-202ENST00000324340 ASB5Q8WWX0 329 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 ST8SIA2Q92186 375 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 POM121L2Q96KW2 1035 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 ESRP2Q9H6T0 727 aaKnown RBP11.05□□□□□ -0.64
DDX39A-202ENST00000324340 HRASLSQ9HDD0 168 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 NOX4Q9NPH5 578 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 SH3BGRL2Q9UJC5 107 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 CARHSP1Q9Y2V2 147 aaKnown RBP11.05□□□□□ -0.64
DDX39A-202ENST00000324340 SVILO95425 2214 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 BOD1L1Q8NFC6 3051 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 CACNA1CQ13936 2221 aa11.05□□□□□ -0.64
DDX39A-202ENST00000324340 TRGV8A0A0C4DH27 118 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 SMIM30A4D0T7 59 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 LGALS8O00214 317 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 P2RY10O00398 339 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 SSX5O60225 188 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 SERPINA5P05154 406 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 FABP1P07148 127 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 ANXA2P07355 339 aaKnown RBP11.04□□□□□ -0.64
DDX39A-202ENST00000324340 ZNF14P17017 642 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-202ENST00000324340 RAB3BP20337 219 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 PVALBP20472 110 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-202ENST00000324340 BMP5P22003 454 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 GDNFP39905 211 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 MAGEB1P43366 347 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 SLC6A9P48067 706 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 CCR6P51684 374 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 UBE2NP61088 152 aaKnown RBP11.04□□□□□ -0.64
DDX39A-202ENST00000324340 DGCR2P98153 550 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 PLP2Q04941 152 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 ZNF345Q14585 488 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 HAGHLQ6PII5 290 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-202ENST00000324340 ATRAIDQ6UW56 229 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 STAC2Q6ZMT1 411 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 Q6ZTK2 550 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 BHLHA15Q7RTS1 189 aaPredicted RBP11.04□□□□□ -0.64
DDX39A-202ENST00000324340 NR2C2APQ86WQ0 139 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 ZGRF1Q86YA3 2104 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 CCDC54Q8NEL0 328 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 SFT2D1Q8WV19 159 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 RND1Q92730 232 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 TMEM106AQ96A25 262 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 C1QTNF5Q9BXJ0 243 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 ARL6Q9H0F7 186 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 OR51M1Q9H341 326 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 ELOVL5Q9NYP7 299 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 OPN4Q9UHM6 478 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 DHDHQ9UQ10 334 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 INTS1Q8N201 2190 aaKnown RBP11.04□□□□□ -0.64
DDX39A-202ENST00000324340 PIEZO2Q9H5I5 2752 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 ZZEF1O43149 2961 aa11.04□□□□□ -0.64
DDX39A-202ENST00000324340 C5orf63A6NC05 138 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 OR5H1A6NKK0 313 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 NUPL2O15504 423 aaKnown RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SYT7O43581 403 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 NDUFB6O95139 128 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 IGKV3-15P01624 115 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 CD3GP09693 182 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 CBR1P16152 277 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SRMP19623 302 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 FSTP19883 344 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 HOXC12P31275 282 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 FAUP35544 74 aaKnown RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SOX2P48431 317 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SRP9P49458 86 aaKnown RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 DEFA5Q01523 94 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 SNAI3Q3KNW1 292 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 RNF212Q495C1 297 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 CDNFQ49AH0 187 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 AVPI1Q5T686 147 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 ALKAL2Q6UX46 152 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 DOK3Q7L591 496 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 FAM169BQ8N8A8 192 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 RELL2Q8NC24 303 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 OR51E1Q8TCB6 317 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 TSEN15Q8WW01 171 aaKnown RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 MS4A3Q96HJ5 214 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 PGAM5Q96HS1 289 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 LYZL4Q96KX0 146 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 OR10A2Q9H208 303 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 RGCCQ9H4X1 137 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 BARX1Q9HBU1 254 aaPredicted RBP11.03□□□□□ -0.64
DDX39A-202ENST00000324340 GPR84Q9NQS5 396 aa11.03□□□□□ -0.64
DDX39A-202ENST00000324340 ZFP57Q9NU63 452 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms