RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 TRAV9-2A0A087WT02 112 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 A0A1B0GTQ1 180 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ACOD1A6NK06 481 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 CLDN24A6NM45 220 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 SLC22A1O15245 554 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF253O75346 499 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ENTPD6O75354 484 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 RCBTB2O95199 551 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 SOX14O95416 240 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 STSP08842 583 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 PIPP12273 146 aaPredicted RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF44P15621 663 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 PGCP20142 388 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 EVI2BP34910 448 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 RORAP35398 523 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 PPICP45877 212 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 OMPP47874 163 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 COPZ1P61923 177 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 HOXC5Q00444 222 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF154Q13106 437 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF141Q15928 474 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 MAPK14Q16539 360 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 DGUOKQ16854 277 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 MRPL2Q5T653 305 aaKnown RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 RPL13AP3Q6NVV1 102 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ADAM5Q6NVV9 412 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 UQCC3Q6UW78 93 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 DGAT2L6Q6ZPD8 337 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 COMTD1Q86VU5 262 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 P2RY8Q86VZ1 359 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 NRMQ8IXM6 262 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF440Q8IYI8 595 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 CLDN22Q8N7P3 220 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 WDSUB1Q8N9V3 476 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ZSCAN4Q8NAM6 433 aaPredicted RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 OR13C2Q8NGS9 318 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 DOK4Q8TEW6 326 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 TMEM239Q8WW34 195 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 PLEKHA8Q96JA3 519 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 CCNL2Q96S94 520 aaPredicted RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 DCUN1D5Q9BTE7 237 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 TMEM43Q9BTV4 400 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 NAA50Q9GZZ1 169 aaKnown RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 RACGAP1Q9H0H5 632 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 NXF5Q9H1B4 397 aaKnown RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 SDHAF3Q9NRP4 125 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 PNO1Q9NRX1 252 aaKnown RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 RPS6KB2Q9UBS0 482 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 ENPP5Q9UJA9 477 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 MED31Q9Y3C7 131 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 CEP290O15078 2479 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 LAMA2P24043 3122 aaKnown RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 MN1Q10571 1320 aaPredicted RBP3.15□□□□□ -1.91
SMCO3-201ENST00000316048 TMEM131Q92545 1883 aa3.15□□□□□ -1.91
SMCO3-201ENST00000316048 TDRD6O60522 2096 aaKnown RBP3.14□□□□□ -1.91
SMCO3-201ENST00000316048 A0A1B0GX78 115 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 LRP5LA4QPB2 252 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 KRTAP16-1A8MUX0 517 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 POLR1CO15160 346 aaPredicted RBP3.14□□□□□ -1.91
SMCO3-201ENST00000316048 CHP2O43745 196 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 AIREO43918 545 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 SERPINA3P01011 423 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 CSTAP01040 98 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 S100A9P06702 114 aaKnown RBP3.14□□□□□ -1.91
SMCO3-201ENST00000316048 HBQ1P09105 142 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 GKN3PP0CG01 181 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 GIMD1P0DJR0 217 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 IFI30P13284 250 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 FOLR1P15328 257 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 CD36P16671 472 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 MYL12AP19105 171 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 LCN1P31025 176 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 RBM34P42696 430 aaKnown RBP3.14□□□□□ -1.91
SMCO3-201ENST00000316048 DUSP3P51452 185 aaPredicted RBP3.14□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF136P52737 540 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 PSPHP78330 225 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 CSTF1Q05048 431 aaKnown RBP3.14□□□□□ -1.91
SMCO3-201ENST00000316048 PRKCDQ05655 676 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 SIGLEC14Q08ET2 396 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 C1DQ13901 141 aaKnown RBP3.14□□□□□ -1.91
SMCO3-201ENST00000316048 NSDHLQ15738 373 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 MOGQ16653 247 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 SNAI3Q3KNW1 292 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 TIMM50Q3ZCQ8 353 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 PDZK1Q5T2W1 519 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 RNLSQ5VYX0 342 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 PVRIGQ6DKI7 326 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 ULK3Q6PHR2 472 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 LINC00299Q6ZSB3 139 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 Q6ZTC4 211 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 CEACAM19Q7Z692 300 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 NAXDQ8IW45 347 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 ZNF615Q8N8J6 731 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 OR52L1Q8NGH7 329 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 OR9Q1Q8NGQ5 310 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 OR4C6Q8NH72 309 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 OR1F12Q8NHA8 337 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 DNAJA4Q8WW22 397 aaPredicted RBP3.14□□□□□ -1.91
SMCO3-201ENST00000316048 NAT6Q93015 286 aa3.14□□□□□ -1.91
SMCO3-201ENST00000316048 YIPF6Q96EC8 236 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms