RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 CYB5BO43169 146 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 HEXBP07686 556 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 AFF3P51826 1226 aaKnown RBP12.9□□□□□ -0.35
COL6A2-202ENST00000310645 UNQ6494/PRO21346Q6UXR6 183 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 ZNF574Q6ZN55 896 aaPredicted RBP12.9□□□□□ -0.35
COL6A2-202ENST00000310645 SUMF1Q8NBK3 374 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 OR52M1Q8NGK5 317 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 OR5L1Q8NGL2 311 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 OR14K1Q8NGZ2 314 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 Q8WTZ3 238 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 LANCL2Q9NS86 450 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 ANAPC10Q9UM13 185 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 KCNIP3Q9Y2W7 256 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 LHFPL6Q9Y693 200 aa12.9□□□□□ -0.35
COL6A2-202ENST00000310645 IGHV3-20A0A0C4DH32 117 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 JMJD7P0C870 316 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 FCGR2AP12318 317 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 P2RY1P47900 373 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 CLRN1P58418 232 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 HSD11B2P80365 405 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 SURF2Q15527 256 aaPredicted RBP12.89□□□□□ -0.35
COL6A2-202ENST00000310645 BRICD5Q6PL45 260 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 FBXW12Q6X9E4 464 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 NUDT16L1Q9BRJ7 211 aaKnown RBP12.89□□□□□ -0.35
COL6A2-202ENST00000310645 SUSD2Q9UGT4 822 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 IGHV5-51A0A0C4DH38 117 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 TSPAN2O60636 221 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 IGHMP01871 453 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 TRGC2P03986 189 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 IGKV3-11P04433 115 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 OR5H8P0DN80 308 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 FABP4P15090 132 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 ZNF17P17021 662 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 APOBEC1P41238 236 aaKnown RBP12.89□□□□□ -0.35
COL6A2-202ENST00000310645 MEX3BQ6ZN04 569 aaKnown RBP12.89□□□□□ -0.35
COL6A2-202ENST00000310645 TCTN2Q96GX1 697 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 SHDQ96IW2 340 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 MESP1Q9BRJ9 268 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 OPA3Q9H6K4 179 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 PARPBPQ9NWS1 579 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 ZDHHC8Q9ULC8 765 aa12.89□□□□□ -0.35
COL6A2-202ENST00000310645 PPP1R2P9O14990 202 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 NOVA1P51513 510 aaKnown RBP12.88□□□□□ -0.35
COL6A2-202ENST00000310645 CCDC54Q8NEL0 328 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 OR2G3Q8NGZ4 309 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 NTNG2Q96CW9 530 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 MUCL1Q96DR8 90 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 TUBD1Q9UJT1 453 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 UNC13CQ8NB66 2214 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 WDR87Q6ZQQ6 2873 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 BLACEA4D250 179 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 ZNF726A6NNF4 738 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 C1orf189Q5VU69 101 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 DMRTC2Q8IXT2 367 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-202ENST00000310645 STT3BQ8TCJ2 826 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 VN1R1Q9GZP7 353 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 WWTR1Q9GZV5 400 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 CHST11Q9NPF2 352 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 COPS7AQ9UBW8 275 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 LIPGQ9Y5X9 500 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 F5H5K5 113 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 GPR137BO60478 399 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 SOD3P08294 240 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 FAHP16930 419 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 NKX6-1P78426 367 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-202ENST00000310645 C20orf196Q8IYI0 205 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 RHBDD1Q8TEB9 315 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 RTN4IP1Q8WWV3 396 aaPredicted RBP12.88□□□□□ -0.35
COL6A2-202ENST00000310645 HS3ST3B1Q9Y662 390 aa12.88□□□□□ -0.35
COL6A2-202ENST00000310645 RBFOX3A6NFN3 312 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 E9PLN8 166 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 SELLP14151 372 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 PRSS12P56730 875 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 ERVFRD-1P60508 538 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 SSTP61278 116 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 GABREP78334 506 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 DLK1P80370 383 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 KDF1Q8NAX2 398 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-202ENST00000310645 DYRK2Q92630 601 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 PGAM5Q96HS1 289 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 GINS3Q9BRX5 216 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 FAAP24Q9BTP7 215 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 LIME1Q9H400 295 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 PRDM13Q9H4Q3 707 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 C2orf16Q68DN1 1984 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 PCDH15Q96QU1 1955 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 NSG1A0A0A6YYJ2 146 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 FAM24AA6NFZ4 105 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 CRYM-AS1A6NIL9 109 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BKO60814 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 F10P00742 488 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BJP06899 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BOP23527 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BBP33778 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 EFNA3P52797 238 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BDP58876 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST1H2BCP62807 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST2H2BEQ16778 126 aa12.87□□□□□ -0.35
COL6A2-202ENST00000310645 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.87□□□□□ -0.35
COL6A2-202ENST00000310645 OR2T2Q6IF00 324 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms