RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 BIDP55957 195 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 EIF4EBP2Q13542 120 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 LAIR1Q6GTX8 287 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ETV3LQ6ZN32 361 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 APCDD1Q8J025 514 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OR10C1Q96KK4 312 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 AK6Q9Y3D8 172 aaKnown RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 TEX50A0A1B0GTY4 177 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 hADV38S2A0JD32 116 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MPPED1O15442 326 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CD8AP01732 235 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ZNF883P0CG24 379 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 HNF1AP20823 631 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 LRRC37A5PQ49AS3 106 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 GALNT10Q86SR1 603 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OR2V2Q96R30 315 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 LRFN3Q9BTN0 628 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ZGRF1Q86YA3 2104 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 FER1L5A0AVI2 2057 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 SPTY2D1-AS1A0A0U1RR47 76 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MAP1LC3B2A6NCE7 125 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 H0Y980 276 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 RD3LP0DJH9 198 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 HLA-GP17693 338 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CTSSP25774 331 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 RAB6CQ53S08 254 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MAP1LC3BQ9GZQ8 125 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 RAB6CQ9H0N0 254 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 BET1LQ9NYM9 111 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CCDC187A0A096LP49 1063 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 LNP1A1A4G5 178 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PVRP15151 417 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PRDX4Q13162 271 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ASTLQ6HA08 431 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 SLC16A12Q6ZSM3 486 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 SHISA5Q8N114 240 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MARCH1Q8TCQ1 289 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 RNF122Q9H9V4 155 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 VSX1Q9NZR4 365 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 PRNDQ9UKY0 176 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MMP17Q9ULZ9 603 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 A0A1B0GVT2 93 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ODAMA1E959 279 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MICBQ29980 383 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 NOXO1Q8NFA2 376 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ST8SIA2Q92186 375 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CITED2Q99967 270 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 NRIP2Q9BQI9 281 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 KIAA1324LA8MWY0 1029 aaPredicted RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 GOSR1O95249 250 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 NQO2P16083 231 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 SNU13P55769 128 aaKnown RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 VMA21Q3ZAQ7 101 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OR5B3Q8NH48 314 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ABHD3Q8WU67 409 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MRPL32Q9BYC8 188 aaKnown RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 AP4M1O00189 453 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OGG1O15527 345 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PRSS54Q6PEW0 395 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 TTC9BQ8N6N2 239 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 HES4Q9HCC6 221 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 TRBV11-1A0A0K0K1C0 115 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 IQCF6A8MYZ5 107 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ALOX12BO75342 701 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 ELNP15502 786 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MPZP25189 248 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 SRSF2Q01130 221 aaKnown RBP3.6□□□□□ -1.83
USH2A-201ENST00000307340 TLE1Q04724 770 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 XAF1Q6GPH4 301 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 OVCH2Q7RTZ1 564 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PAQR8Q8TEZ7 354 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 SLAMF6Q96DU3 332 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CACNG5Q9UF02 275 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 HCFC2Q9Y5Z7 792 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PQLC2LA1A4F0 135 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 DCDC2BA2VCK2 349 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CLDN1O95832 211 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 SMIM18P0DKX4 95 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 VIPR2P41587 438 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 PRICKLE4Q2TBC4 344 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 SFRP2Q96HF1 295 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 MAP1LC3CQ9BXW4 147 aa3.6□□□□□ -1.83
USH2A-201ENST00000307340 CA3P07451 260 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 OR4Q2P0C623 313 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 HYAL2Q12891 473 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 KIAA0141Q14154 515 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 TP53I3Q53FA7 332 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 HAPLN2Q9GZV7 340 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 C11orf54Q9H0W9 315 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 CXCL16Q9H2A7 254 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 AK3Q9UIJ7 227 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 IGSF23A1L1A6 192 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 OR6C68A6NDL8 312 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 MRPL3P09001 348 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 PKIAP61925 76 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 DHRS2Q13268 280 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 INO80CQ6PI98 192 aaPredicted RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 RBM23Q86U06 439 aaKnown RBP3.59□□□□□ -1.83
USH2A-201ENST00000307340 DTX1Q86Y01 620 aa3.59□□□□□ -1.83
USH2A-201ENST00000307340 SPNS2Q8IVW8 549 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms