RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 TOMM20LQ6UXN7 152 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 ARL17AQ8IVW1 177 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 MS4A7Q9GZW8 240 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 CMC2Q9NRP2 79 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 MRPS16Q9Y3D3 137 aaKnown RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 AKAP11Q9UKA4 1901 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 M0R082 166 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 TMPRSS11DO60235 418 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 GLULP15104 373 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 PIGPP57054 158 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 HLXQ14774 488 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 SHHQ15465 462 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 LIPNQ5VXI9 398 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 SAXO2Q658L1 398 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 TMEM102Q8N9M5 508 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 BEND2Q8NDZ0 799 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 KTI12Q96EK9 354 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 PDXPQ96GD0 296 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 PKMYT1Q99640 499 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 C11orf54Q9H0W9 315 aaPredicted RBP10.88□□□□□ -0.67
PCF11-201ENST00000298281 PLEKHA2Q9HB19 425 aa10.88□□□□□ -0.67
PCF11-201ENST00000298281 ATXN7O15265 892 aaPredicted RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 CBR3O75828 277 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 HRASP01112 189 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 TFAP2AP05549 437 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 MMP11P24347 488 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 GCAP28676 217 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 DUSP5Q16690 384 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 OTUD1Q5VV17 481 aaPredicted RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 SPPL3Q8TCT6 385 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 TMEM101Q96IK0 257 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SDF2Q99470 211 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 NTN4Q9HB63 628 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 ZNF354AO60765 605 aaPredicted RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 APELAP0DMC3 54 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 ZNF273Q14593 569 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 FCN2Q15485 313 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 CGB2Q6NT52 195 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 LYSMD2Q8IV50 215 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 RBPMSQ93062 196 aaKnown RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 PTX4Q96A99 478 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 MAGT1Q9H0U3 335 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SRD5A3Q9H8P0 318 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SPTA1P02549 2419 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 DSCR3O14972 297 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 ZXDAP98168 799 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 PRSS45Q7RTY3 260 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 ANKRD53Q8N9V6 530 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SLC25A32Q9H2D1 315 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SIRT3Q9NTG7 399 aaPredicted RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 LRP3O75074 770 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 BTF3P20290 206 aaKnown RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 KLHDC9Q8NEP7 349 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 MS4A6EQ96DS6 147 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 NPAS1Q99742 590 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 NIPSNAP1Q9BPW8 284 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 NTNG1Q9Y2I2 539 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 LOC107986453A0A1B0GWG9 222 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 IDSB3KWA1 339 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 LINC01387J3KSC0 135 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 TAPBPO15533 448 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SSBP1Q04837 148 aaKnown RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 CIRBPQ14011 172 aaKnown RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 ELFN2Q5R3F8 820 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SYS1Q8N2H4 156 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 OR51S1Q8NGJ8 323 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 UBE2ZQ9H832 354 aaPredicted RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 CCL26Q9Y258 94 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 E5RGE8 158 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SYT14P1Q58G82 188 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 SPINK9Q5DT21 86 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 LKAAEAR1Q8TD35 194 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 CLDN23Q96B33 292 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 FLYWCH2Q96CP2 140 aaKnown RBP10.87□□□□□ -0.67
PCF11-201ENST00000298281 SLAMF6Q96DU3 332 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 TAS2R4Q9NYW5 299 aa10.87□□□□□ -0.67
PCF11-201ENST00000298281 OR2A25A4D2G3 310 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 OR4C13Q8NGP0 309 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 DMRTA2Q96SC8 542 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 PHF7Q9BWX1 381 aaPredicted RBP10.86□□□□□ -0.67
PCF11-201ENST00000298281 NSG2Q9Y328 171 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 RGPD5Q99666 1765 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 SDK2Q58EX2 2172 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 TFPI2P48307 235 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 MEOX2P50222 304 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 LRRC26Q2I0M4 334 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 AGBL4Q5VU57 503 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 MYPOPQ86VE0 399 aaPredicted RBP10.86□□□□□ -0.67
PCF11-201ENST00000298281 MRGPRX4Q96LA9 322 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 OXGR1Q96P68 337 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 LYRM2Q9NU23 88 aaPredicted RBP10.86□□□□□ -0.67
PCF11-201ENST00000298281 HSPB8Q9UJY1 196 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 LINC01553A4QN01 128 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 M0R1X1 148 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 COTL1Q14019 142 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 PYCR3Q53H96 274 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 SOWAHCQ53LP3 525 aaPredicted RBP10.86□□□□□ -0.67
PCF11-201ENST00000298281 SLC25A30Q5SVS4 291 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 GLCCI1Q86VQ1 547 aa10.86□□□□□ -0.67
PCF11-201ENST00000298281 LRP11Q86VZ4 500 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms