RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 MST1LQ2TV78 715 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 C1QL2Q7Z5L3 287 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 MUC15Q8N387 334 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 PTX4Q96A99 478 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 OR51I2Q9H344 312 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 ABCB10Q9NRK6 738 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 GHRLQ9UBU3 117 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 FBLN5Q9UBX5 448 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 ZDHHC8Q9ULC8 765 aa16.07■□□□□ 0.16
PDLIM3-202ENST00000284770 UBBP0CG47 229 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 TMEM225BP0DP42 221 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 NR4A2P43354 598 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 PYDC2Q56P42 97 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 WDR86Q86TI4 376 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 LYSMD2Q8IV50 215 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 ZNF611Q8N823 705 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 FBXW5Q969U6 566 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 ELMOD3Q96FG2 381 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 S100A16Q96FQ6 103 aaKnown RBP16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 ABHD1Q96SE0 405 aa16.06■□□□□ 0.16
PDLIM3-202ENST00000284770 A0A1W2PPR1 153 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 LRP5LA4QPB2 252 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 M0R233 179 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 SPRY1O43609 319 aaPredicted RBP16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 SPRY3O43610 288 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 CTAG2O75638 210 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 PLATP00750 562 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 VSIG8P0DPA2 414 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 ZNF154Q13106 437 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 UNC119Q13432 240 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 SWI5Q1ZZU3 235 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 STEAP3Q658P3 488 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 OR10K2Q6IF99 312 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 PYHIN1Q6K0P9 492 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 BAIAP2L2Q6UXY1 529 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 ASCL4Q6XD76 172 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 FBXL14Q8N1E6 418 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 ZSCAN4Q8NAM6 433 aaPredicted RBP16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 PXT1Q8NFP0 134 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 S100A13Q99584 98 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 ING4Q9UNL4 249 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 ROS1P08922 2347 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 A1L4Q6 167 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 FAM221AA4D161 298 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 HS3ST1O14792 307 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 IGHV1-46P01743 117 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 CSF3P09919 207 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 RAB6AP20340 208 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 CDK2P24941 298 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 CD200P41217 278 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 HAGHLQ6PII5 290 aaPredicted RBP16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 SLC25A26Q70HW3 274 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 OR51F2Q8NH61 342 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 DIRC2Q96SL1 478 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 PKIBQ9C010 78 aa16.05■□□□□ 0.16
PDLIM3-202ENST00000284770 C17orf100A8MU93 164 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 TMEM14DPA8MWL7 114 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 ANGPTL7O43827 346 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 GRPP07492 148 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 ADH4P08319 380 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 IL7P13232 177 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 MPZP25189 248 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 SP5Q6BEB4 398 aaPredicted RBP16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 IZUMO1Q8IYV9 350 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 SAXO1Q8IYX7 474 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 OR8H2Q8N162 312 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 Q8N402 240 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 CELF2-AS1Q8N7Q2 184 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 SCCPDHQ8NBX0 429 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 FAIMQ9NVQ4 179 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 RABL2AQ9UBK7 228 aaPredicted RBP16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 RABL2BQ9UNT1 228 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 COL12A1Q99715 3063 aa16.04■□□□□ 0.16
PDLIM3-202ENST00000284770 IGKV1-12A0A0C4DH73 117 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 PTBP3O95758 552 aaKnown RBP16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 IGKV1D-12P01611 117 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 MNDAP41218 407 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 PTH2RP49190 550 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 IL24Q13007 206 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 SLC22A6Q4U2R8 563 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 OR2W3Q7Z3T1 314 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 TMEM200AQ86VY9 491 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 MKXQ8IYA7 352 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 KCNG3Q8TAE7 436 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 AQP3Q92482 292 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 OR2V2Q96R30 315 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 METTL9Q9H1A3 318 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 TLNRD1Q9H1K6 362 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 MS4A5Q9H3V2 200 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 IL19Q9UHD0 177 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 RAB22AQ9UL26 194 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 IGHV3-64DA0A0J9YX35 117 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 J3QT63 122 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 XRCC3O43542 346 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 ZNF780AO75290 641 aaPredicted RBP16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 KDM4BO94953 1096 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 CYB5AP00167 134 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 HLA-DQB1P01920 261 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 TNFSF4P23510 183 aa16.03■□□□□ 0.16
PDLIM3-202ENST00000284770 SRP9P49458 86 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms