RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 RGS7BPQ6MZT1 257 aaPredicted RBP14.8□□□□□ -0.04
PHRF1-201ENST00000264555 S100A7AQ86SG5 101 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 ADIPOR1Q96A54 375 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 SEC16AO15027 2179 aa14.8□□□□□ -0.04
PHRF1-201ENST00000264555 NYNRINQ9P2P1 1898 aaKnown RBP14.79□□□□□ -0.04
PHRF1-201ENST00000264555 OR13C7P0DN81 318 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 RAB5CP51148 216 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 OR2T2Q6IF00 324 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 C20orf196Q8IYI0 205 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 HGDQ93099 445 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 GALMQ96C23 342 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 PIK3IP1Q96FE7 263 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 CTSBP07858 339 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 NOVA1P51513 510 aaKnown RBP14.79□□□□□ -0.04
PHRF1-201ENST00000264555 MLF1P58340 268 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 FAM122CQ6P4D5 195 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 NHLRC1Q6VVB1 395 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 LRRTM1Q86UE6 522 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 CISD2Q8N5K1 135 aaKnown RBP14.79□□□□□ -0.04
PHRF1-201ENST00000264555 ADAT1Q9BUB4 502 aaKnown RBP14.79□□□□□ -0.04
PHRF1-201ENST00000264555 RNF150Q9ULK6 438 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 ZFP92A6NM28 416 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 CRYABP02511 175 aaKnown RBP14.79□□□□□ -0.04
PHRF1-201ENST00000264555 SULT1A3P0DMM9 295 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 SULT1A4P0DMN0 295 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 PDCD1Q15116 288 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 MRGPREQ86SM8 312 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 VASH2Q86V25 355 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 PECRQ9BY49 303 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 LAMP3Q9UQV4 416 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 DNASE2BQ8WZ79 361 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 APOA2P02652 100 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 KIR3DL2P43630 455 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 TESK1Q15569 626 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 EDARADDQ8WWZ3 215 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 PRRX2Q99811 253 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 MAGT1Q9H0U3 335 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 ATP23Q9Y6H3 246 aa14.79□□□□□ -0.04
PHRF1-201ENST00000264555 TAGLN2P37802 199 aaKnown RBP14.78□□□□□ -0.04
PHRF1-201ENST00000264555 OR2B11Q5JQS5 317 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 HIST2H3PS2Q5TEC6 136 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 MOB1BQ7L9L4 216 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 ARV1Q9H2C2 271 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 QPCTLQ9NXS2 382 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 TMED3Q9Y3Q3 217 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 ASCC3Q8N3C0 2202 aaKnown RBP14.78□□□□□ -0.04
PHRF1-201ENST00000264555 A0A1W2PR77 199 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 ANKRD34CP0C6C1 535 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 ELLP55199 621 aaPredicted RBP14.78□□□□□ -0.04
PHRF1-201ENST00000264555 FOXL2P58012 376 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.78□□□□□ -0.04
PHRF1-201ENST00000264555 FAM58AQ8N1B3 248 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 CLDN23Q96B33 292 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 PGLYRP3Q96LB9 341 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 B4E171 279 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 TSPAN7P41732 249 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 SP6Q3SY56 376 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 SCCPDHQ8NBX0 429 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 UCN2Q96RP3 112 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 RYDENQ9NUL5 291 aaKnown RBP14.78□□□□□ -0.04
PHRF1-201ENST00000264555 CYB5R1Q9UHQ9 305 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 RCL1Q9Y2P8 373 aaKnown RBP14.78□□□□□ -0.04
PHRF1-201ENST00000264555 ZNF724A8MTY0 619 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 CA6P23280 308 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 ZNF468Q5VIY5 522 aaPredicted RBP14.78□□□□□ -0.04
PHRF1-201ENST00000264555 RPUSD3Q6P087 351 aaKnown RBP14.78□□□□□ -0.04
PHRF1-201ENST00000264555 DEFB124Q8NES8 71 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 ST7LQ8TDW4 575 aa14.78□□□□□ -0.04
PHRF1-201ENST00000264555 TMEM30CPA0ZSE6 113 aa14.77□□□□□ -0.04
PHRF1-201ENST00000264555 CIB3Q96Q77 187 aaPredicted RBP14.77□□□□□ -0.04
PHRF1-201ENST00000264555 SF3B6Q9Y3B4 125 aaKnown RBP14.77□□□□□ -0.04
PHRF1-201ENST00000264555 CXCL3P19876 107 aa14.77□□□□□ -0.04
PHRF1-201ENST00000264555 DEFB108BQ8NET1 73 aa14.77□□□□□ -0.04
PHRF1-201ENST00000264555 OR10P1Q8NGE3 313 aa14.77□□□□□ -0.04
PHRF1-201ENST00000264555 OR5M8Q8NGP6 311 aa14.77□□□□□ -0.04
PHRF1-201ENST00000264555 VWCEQ96DN2 955 aa14.77□□□□□ -0.04
PHRF1-201ENST00000264555 CHRNA10Q9GZZ6 450 aa14.77□□□□□ -0.04
PHRF1-201ENST00000264555 CEP290O15078 2479 aa14.77□□□□□ -0.05
PHRF1-201ENST00000264555 ZNF891A8MT65 544 aaPredicted RBP14.77□□□□□ -0.05
PHRF1-201ENST00000264555 MPC2O95563 127 aa14.77□□□□□ -0.05
PHRF1-201ENST00000264555 AGFG1P52594 562 aaKnown RBP14.77□□□□□ -0.05
PHRF1-201ENST00000264555 C1orf87Q8N0U7 546 aa14.77□□□□□ -0.05
PHRF1-201ENST00000264555 SOCS1O15524 211 aa14.77□□□□□ -0.05
PHRF1-201ENST00000264555 CD37P11049 281 aa14.77□□□□□ -0.05
PHRF1-201ENST00000264555 SURF2Q15527 256 aaPredicted RBP14.77□□□□□ -0.05
PHRF1-201ENST00000264555 NUFIP2Q7Z417 695 aaKnown RBP14.77□□□□□ -0.05
PHRF1-201ENST00000264555 PTX4Q96A99 478 aa14.77□□□□□ -0.05
PHRF1-201ENST00000264555 SCMH1Q96GD3 660 aa14.77□□□□□ -0.05
PHRF1-201ENST00000264555 PSENENQ9NZ42 101 aa14.77□□□□□ -0.05
PHRF1-201ENST00000264555 THBS3P49746 956 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 HIST2H3AQ71DI3 136 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 ZNF75AQ96N20 296 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 OR5B21A6NL26 309 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 CSF2RBP32927 897 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 BORCS7Q96B45 105 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 BTF3L4Q96K17 158 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 TAAR6Q96RI8 345 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 ZSWIM8A7E2V4 1837 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 TRPM7Q96QT4 1865 aa14.76□□□□□ -0.05
PHRF1-201ENST00000264555 DCTN6O00399 190 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms