RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 CALRP27797 417 aaKnown RBP11.86□□□□□ -0.51
VPS25-201ENST00000253794 CFPP27918 469 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 ART1P52961 327 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 PDZK1IP1Q13113 114 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 DDI2Q5TDH0 399 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 TEX36Q5VZQ5 186 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 RNF144BQ7Z419 303 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 POC1AQ8NBT0 407 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 PXT1Q8NFP0 134 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 ZNF671Q8TAW3 534 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 TMIGD2Q96BF3 282 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 NRIP2Q9BQI9 281 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 UQCC2Q9BRT2 126 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 SLITRK2Q9H156 845 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 HES4Q9HCC6 221 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 DCAF16Q9NXF7 216 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 GSTK1Q9Y2Q3 226 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 NPTNQ9Y639 398 aa11.86□□□□□ -0.51
VPS25-201ENST00000253794 A0A096LNT2 108 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 SHISA3A0PJX4 238 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 CYSRT1A8MQ03 144 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 SYNGR1O43759 233 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 RHBDL1O75783 438 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 CYB5R3P00387 301 aaPredicted RBP11.85□□□□□ -0.51
VPS25-201ENST00000253794 IGHV2-70P01814 119 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 ZNF93P35789 620 aaPredicted RBP11.85□□□□□ -0.51
VPS25-201ENST00000253794 MTNR1BP49286 362 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 C1orf100Q5SVJ3 147 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 C22orf42Q6IC83 251 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 GPR141Q7Z602 305 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 ANGPTL5Q86XS5 388 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 FAM90A1Q86YD7 464 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 ANKRD13BQ86YJ7 626 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 MKXQ8IYA7 352 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 Q8NFD4 153 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 LRRC29Q8WV35 223 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 RAB1CQ92928 201 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 C12orf43Q96C57 262 aaKnown RBP11.85□□□□□ -0.51
VPS25-201ENST00000253794 FOXRED1Q96CU9 486 aaPredicted RBP11.85□□□□□ -0.51
VPS25-201ENST00000253794 TIMD4Q96H15 378 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 KCTD7Q96MP8 289 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 GFI1Q99684 422 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 PIMREGQ9BSJ6 248 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 FUNDC2Q9BWH2 189 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 RASL12Q9NYN1 266 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 WIPI2Q9Y4P8 454 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 DYSFO75923 2080 aa11.85□□□□□ -0.51
VPS25-201ENST00000253794 CREBBPQ92793 2442 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 PPIAL4EA0A075B759 164 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 IGHV4-30-2A0A087WSY4 118 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 PPIAL4DF5H284 164 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 AIREO43918 545 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 KDM4BO94953 1096 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 GABARAPO95166 117 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 MAS1P04201 325 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 PPIAL4FP0DN26 164 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 MUC1P15941 1255 aaPredicted RBP11.84□□□□□ -0.51
VPS25-201ENST00000253794 CPT2P23786 658 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 PTGFRP43088 359 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 NR4A2P43354 598 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 GPR6P46095 362 aaPredicted RBP11.84□□□□□ -0.51
VPS25-201ENST00000253794 PSMD7P51665 324 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 BTG1P62324 171 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 ZMYND11Q15326 602 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 TMEM155Q4W5P6 130 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 FAM166AQ6J272 317 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 SLC16A12Q6ZSM3 486 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 SLC25A26Q70HW3 274 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 PEG10Q86TG7 708 aaKnown RBP11.84□□□□□ -0.51
VPS25-201ENST00000253794 TPRA1Q86W33 373 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 LRRC28Q86X40 367 aaPredicted RBP11.84□□□□□ -0.51
VPS25-201ENST00000253794 Q8IYB0 196 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 SPACA5Q96QH8 159 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 CHCHD6Q9BRQ6 235 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 CENPOQ9BU64 300 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 BPESC1Q9GZL8 116 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 SEBOXQ9HB31 216 aaPredicted RBP11.84□□□□□ -0.51
VPS25-201ENST00000253794 EXOSC4Q9NPD3 245 aaKnown RBP11.84□□□□□ -0.51
VPS25-201ENST00000253794 TREM2Q9NZC2 230 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 IL36GQ9NZH8 169 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 MTCH1Q9NZJ7 389 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 PPIAL4AQ9Y536 164 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 ITPR3Q14573 2671 aa11.84□□□□□ -0.51
VPS25-201ENST00000253794 IGKV1-12A0A0C4DH73 117 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 hCG_1807616A0A1W2PRN6 198 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 LGALS8O00214 317 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 PDCD5O14737 125 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 TNFRSF13BO14836 293 aaPredicted RBP11.83□□□□□ -0.52
VPS25-201ENST00000253794 PPIHO43447 177 aaKnown RBP11.83□□□□□ -0.52
VPS25-201ENST00000253794 CYB5AP00167 134 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 IGKV1D-12P01611 117 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 EGR1P18146 543 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 MYL9P24844 172 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 MDH2P40926 338 aaKnown RBP11.83□□□□□ -0.52
VPS25-201ENST00000253794 HNRNPA0Q13151 305 aaKnown RBP11.83□□□□□ -0.52
VPS25-201ENST00000253794 ZNF404Q494X3 552 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 GLT8D1Q68CQ7 371 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 ELP2Q6IA86 826 aa11.83□□□□□ -0.52
VPS25-201ENST00000253794 MUC20Q8N307 709 aaPredicted RBP11.83□□□□□ -0.52
VPS25-201ENST00000253794 PNLDC1Q8NA58 520 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms