RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 ARRDC1Q8N5I2 433 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 C10orf35Q96D05 121 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 WBP1Q96G27 269 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 FAHD2AQ96GK7 314 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 ZNF701Q9NV72 531 aaPredicted RBP16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 GPR132Q9UNW8 380 aa16.25■□□□□ 0.19
PDLIM4-201ENST00000253754 MSTNO14793 375 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 DUS4LO95620 317 aaKnown RBP16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 PDGFAP04085 211 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 RLN2P04090 185 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 NMBP08949 121 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 CPT2P23786 658 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 SLC9A3R2Q15599 337 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 FAM189A2Q15884 450 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 ACTBL2Q562R1 376 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 RIPPLY2Q5TAB7 128 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 AADACL3Q5VUY0 350 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 C11orf87Q6NUJ2 197 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 ANGPTL6Q8NI99 470 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 WDR13Q9H1Z4 485 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 KIF25Q9UIL4 384 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 ZZEF1O43149 2961 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 URB1O60287 2271 aaKnown RBP16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 C13orf42A0A1B0GVH6 325 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 SNAPC5O75971 98 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 CCDC28AQ8IWP9 274 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 SUN5Q8TC36 379 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 EHFQ9NZC4 300 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 COMMD9Q9P000 198 aa16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 NOSIPQ9Y314 301 aaKnown RBP16.24■□□□□ 0.19
PDLIM4-201ENST00000253754 A0A096LPE4 126 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 A0A1W2PPZ6 126 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 WT1P19544 449 aaPredicted RBP16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 OR3A2P47893 321 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 FOXG1P55316 489 aaPredicted RBP16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 CLDN18P56856 261 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 TAF9Q16594 264 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 PABPC1L2AQ5JQF8 200 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 CPEB3Q8NE35 698 aaKnown RBP16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 OR6K3Q8NGY3 331 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 SCARB1Q8WTV0 552 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 Q96M66 194 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 RTBDNQ9BSG5 229 aaPredicted RBP16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 TTTY12Q9BZ98 90 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 SLC7A10Q9NS82 523 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 TNFSF18Q9UNG2 199 aa16.23■□□□□ 0.19
PDLIM4-201ENST00000253754 ZNF587BE7ETH6 402 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 MRPL33O75394 65 aaKnown RBP16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 SCO1O75880 301 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 CRYZL1O95825 349 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 HLA-GP17693 338 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 SERPINF1P36955 418 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 CBX5P45973 191 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 FGL1Q08830 312 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 C3AR1Q16581 482 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 TUSC5Q8IXB3 177 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 PLEKHJ1Q9NW61 149 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 C5orf51A6NDU8 294 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 FIGNL2A6NMB9 653 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 DBX1A6NMT0 343 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 SERPINE3A8MV23 424 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 SERPINA5P05154 406 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 MMP7P09237 267 aaPredicted RBP16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 EDN3P14138 238 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 SUPT4H1P63272 117 aaKnown RBP16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 FAM3AP98173 230 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 RSU1Q15404 277 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 TMEM128Q5BJH2 165 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 CLEC18BQ6UXF7 455 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 LHFPL1Q86WI0 220 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 DYRK2Q92630 601 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 SPSB1Q96BD6 273 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 CALHM2Q9HA72 323 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 OSGIN2Q9Y236 505 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 NCOR2Q9Y618 2525 aa16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 PRRC2CQ9Y520 2896 aaKnown RBP16.22■□□□□ 0.19
PDLIM4-201ENST00000253754 hCG_38984A0A1B0GV85 526 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 RNF222A6NCQ9 220 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 DHRS7CA6NNS2 312 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 NRASP01111 189 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 GLRA1P23415 457 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 AGTR1P30556 359 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 TMEM65Q6PI78 240 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 BRICD5Q6PL45 260 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 FAM219AQ8IW50 185 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 BATF2Q8N1L9 274 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 RELL2Q8NC24 303 aaPredicted RBP16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 CCDC54Q8NEL0 328 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 FNDC9Q8TBE3 224 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 VRK1Q99986 396 aaPredicted RBP16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 FAAP24Q9BTP7 215 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 METTL9Q9H1A3 318 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 PPA2Q9H2U2 334 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 SPENQ96T58 3664 aaKnown RBP16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 IGKV1-12A0A0C4DH73 117 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 MPTX1A8MV57 137 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 ADAP1O75689 374 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 IGKV1D-12P01611 117 aa16.21■□□□□ 0.19
PDLIM4-201ENST00000253754 CCL2P13500 99 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms