RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 MYOZ1Q9NP98 299 aaPredicted RBP4.86□□□□□ -1.63
CHD2-227ENST00000637572 MRPL15Q9P015 296 aaKnown RBP4.86□□□□□ -1.63
CHD2-227ENST00000637572 RTTNQ86VV8 2226 aa4.86□□□□□ -1.63
CHD2-227ENST00000637572 KIAA1671Q9BY89 1806 aa4.86□□□□□ -1.63
CHD2-227ENST00000637572 PIEZO2Q9H5I5 2752 aa4.86□□□□□ -1.63
CHD2-227ENST00000637572 SZT2Q5T011 3432 aa4.86□□□□□ -1.63
CHD2-227ENST00000637572 ICE1Q9Y2F5 2266 aa4.86□□□□□ -1.63
CHD2-227ENST00000637572 OR4C45A6NMZ5 311 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 PRSS47A8MTI9 375 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 MS4A18H0YCH9 400 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 CCL21O00585 134 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 TOR1AO14656 332 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ARPC1BO15143 372 aaKnown RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 TMPRSS2O15393 492 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 TRAF3IP2O43734 574 aaPredicted RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 PRH1P02810 166 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ACSM4P0C7M7 580 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ZNF728P0DKX0 622 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 GAAP10253 952 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 GABRB1P18505 474 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 GIFP27352 417 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ZNF83P51522 516 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 FOXL2P58012 376 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ASAH1Q13510 395 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 KISS1Q15726 138 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 MS4A18Q3C1V0 323 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 FNDC7Q5VTL7 733 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 S100A7AQ86SG5 101 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 FAM185AQ8N0U4 392 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 DTX3Q8N9I9 347 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 BEST4Q8NFU0 473 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 SCGB1C1Q8TD33 95 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 FBXW5Q969U6 566 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 UPRTQ96BW1 309 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ST3GAL6Q9Y274 331 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 NOTCH4Q99466 2003 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 COL6A3P12111 3177 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 IGLV1-36A0A0B4J1U3 117 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 F5H5P2 479 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 SHOXO15266 292 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 CA11O75493 328 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 SCAF4O95104 1147 aaKnown RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 WISP1O95388 367 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ELK1P19419 428 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 TGM1P22735 817 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 PTGFRP43088 359 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ALDH3B1P43353 468 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 MMP15P51511 669 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 RAP2BP61225 183 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 RAB31Q13636 194 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 GRK1Q15835 563 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 SLC25A35Q3KQZ1 300 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 PLA1AQ53H76 456 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 LINC00596Q86U02 117 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 NOXA1Q86UR1 476 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ARRDC1Q8N5I2 433 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 OR5A2Q8NGI9 324 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 OR5D13Q8NGL4 314 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 OR10J5Q8NHC4 309 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ASB13Q8WXK3 278 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 TIMP4Q99727 224 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 NUDT16L1Q9BRJ7 211 aaKnown RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 AKIRIN1Q9H9L7 192 aaPredicted RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 C12orf4Q9NQ89 552 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 CYB5R1Q9UHQ9 305 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ARHGEF17Q96PE2 2063 aaPredicted RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 TEP1Q99973 2627 aaKnown RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 HMX3A6NHT5 357 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 CD300LBA8K4G0 201 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ABCD4O14678 606 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 SMAD9O15198 467 aaKnown RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 RP2O75695 350 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 CBR1P16152 277 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ZNF708P17019 499 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 NFYAP23511 347 aaPredicted RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 PRDX4Q13162 271 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 LYPD4Q6UWN0 246 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 PIP4P1Q86T03 277 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 PRR18Q8N4B5 295 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 OR8B12Q8NGG6 310 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ST7LQ8TDW4 575 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 PTX4Q96A99 478 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ELMOD3Q96FG2 381 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 PLEKHF2Q9H8W4 249 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 B3GNT2Q9NY97 397 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ERRFI1Q9UJM3 462 aaPredicted RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 LAMP3Q9UQV4 416 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 SF3B6Q9Y3B4 125 aaKnown RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 A0A0G2JMP0 313 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 FAM90A27PA6NNH2 459 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 MAGEB4O15481 346 aaPredicted RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 MED6O75586 246 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 C1QCP02747 245 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 TRAPPC2P0DI81 140 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 TRAPPC2BP0DI82 140 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 KCNJ3P48549 501 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 EDDM3BP56851 147 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 RPL19P84098 196 aaKnown RBP4.85□□□□□ -1.63
CHD2-227ENST00000637572 ZNF92Q03936 586 aa4.85□□□□□ -1.63
CHD2-227ENST00000637572 ETFDHQ16134 617 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms