RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 OR56B2PQ8NGI1 322 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 MED30Q96HR3 178 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 P2RX4Q99571 388 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 EDA2RQ9HAV5 297 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 SMAD5-AS1Q9Y6J3 95 aa11.05□□□□□ -0.64
SNX1-214ENST00000625244 CDIPTO14735 213 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 CCNB2O95067 398 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 LPLP06858 475 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 ACAA1P09110 424 aaPredicted RBP11.04□□□□□ -0.64
SNX1-214ENST00000625244 FCGR1AP12314 374 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 MYCNOSP40205 109 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 GPR4P46093 362 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 TBPL2Q6SJ96 375 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 TMPRSS11FQ6ZWK6 438 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 OVCH2Q7RTZ1 564 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 FAM122BQ7Z309 247 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 LINC00346Q8IVM7 164 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 OR13C2Q8NGS9 318 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 OR8S1Q8NH09 359 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 ANGPTL6Q8NI99 470 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 FAM46AQ96IP4 442 aaKnown RBP11.04□□□□□ -0.64
SNX1-214ENST00000625244 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 PITX2Q99697 317 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 C19orf12Q9NSK7 152 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 LYVE1Q9Y5Y7 322 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 U3KQV3 271 aa11.04□□□□□ -0.64
SNX1-214ENST00000625244 NAA10P41227 235 aaPredicted RBP11.03□□□□□ -0.64
SNX1-214ENST00000625244 DYNLT3P51808 116 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 RPL23AP62750 156 aaKnown RBP11.03□□□□□ -0.64
SNX1-214ENST00000625244 GLYATL3Q5SZD4 288 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 SLC18B1Q6NT16 456 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 ZFP1Q6P2D0 407 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 OR2W3Q7Z3T1 314 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 ZNRF1Q8ND25 227 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 OR5K1Q8NHB7 308 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 GNPDA2Q8TDQ7 276 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 ISOC1Q96CN7 298 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 MALSU1Q96EH3 234 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 ZNF570Q96NI8 536 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 ATF6BQ99941 703 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 NUAK2Q9H093 628 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 PNRC2Q9NPJ4 139 aaKnown RBP11.03□□□□□ -0.64
SNX1-214ENST00000625244 DNAJB9Q9UBS3 223 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 SCOCQ9UIL1 159 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 AP4S1Q9Y587 144 aa11.03□□□□□ -0.64
SNX1-214ENST00000625244 UNC119BA6NIH7 251 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 SH2D7A6NKC9 451 aaPredicted RBP11.02□□□□□ -0.65
SNX1-214ENST00000625244 ARG1P05089 322 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 CD14P08571 375 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 SNRNP70P08621 437 aaKnown RBP11.02□□□□□ -0.65
SNX1-214ENST00000625244 FASP25445 335 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 OMPP47874 163 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 CENPAP49450 140 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 HMGA2P52926 109 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 SLC25A1P53007 311 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 RAB25P57735 213 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 ACTR3P61158 418 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 KPNB1Q14974 876 aaKnown RBP11.02□□□□□ -0.65
SNX1-214ENST00000625244 SEC23BQ15437 767 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 ZBED5Q49AG3 693 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 ABCA11PQ4W5N1 156 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 ZNF782Q6ZMW2 699 aaPredicted RBP11.02□□□□□ -0.65
SNX1-214ENST00000625244 STMN2Q93045 179 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 UTP4Q969X6 686 aaKnown RBP11.02□□□□□ -0.65
SNX1-214ENST00000625244 FOXRED1Q96CU9 486 aaPredicted RBP11.02□□□□□ -0.65
SNX1-214ENST00000625244 TLNRD1Q9H1K6 362 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 PPP1R3EQ9H7J1 279 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 ZMAT4Q9H898 229 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 ZNF556Q9HAH1 456 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 ARMC1Q9NVT9 282 aa11.02□□□□□ -0.65
SNX1-214ENST00000625244 FAM90A22PA8MWA6 464 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 ODF3BA8MYP8 253 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 M0R135 149 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 DCTN6O00399 190 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 TIPRLO75663 272 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 NDUFB2O95178 105 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 CCL3L1P16619 93 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 GABRA2P47869 451 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 TPTEP56180 551 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 KRR1Q13601 381 aaKnown RBP11.01□□□□□ -0.65
SNX1-214ENST00000625244 MICAQ29983 383 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 RFX4Q33E94 735 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 TMEM200BQ69YZ2 307 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 RPL13AP3Q6NVV1 102 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 ZNF329Q86UD4 541 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 OSR2Q8N2R0 312 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 TMEM185AQ8NFB2 350 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 OR10G2Q8NGC3 310 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 OR52L1Q8NGH7 329 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 FANK1Q8TC84 345 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 GIPC3Q8TF64 312 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 ZNF799Q96GE5 643 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 TSSK2Q96PF2 358 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 FUZQ9BT04 418 aa11.01□□□□□ -0.65
SNX1-214ENST00000625244 ZNF256Q9Y2P7 627 aaPredicted RBP11.01□□□□□ -0.65
SNX1-214ENST00000625244 TBL2Q9Y4P3 447 aaKnown RBP11.01□□□□□ -0.65
SNX1-214ENST00000625244 ERICH4A6NGS2 130 aa11□□□□□ -0.65
SNX1-214ENST00000625244 NUDT19A8MXV4 375 aa11□□□□□ -0.65
SNX1-214ENST00000625244 CDC42EP2O14613 210 aa11□□□□□ -0.65
SNX1-214ENST00000625244 AZGP1P25311 298 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms