RNA–Protein interactions for RNA: ENST00000622697.4

GABRB3-215, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 5,876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-215ENST00000622697 PARP14Q460N5 1801 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 LEUTXA8MZ59 168 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 SOCS1O15524 211 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 MT-ND4LP03901 98 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 GALNSP34059 522 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 PMP22Q01453 160 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 FAM185AQ8N0U4 392 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 OR4F5Q8NH21 305 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 OR4F4Q96R69 305 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 NUDT19A8MXV4 375 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 FUT7Q11130 342 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 HGDQ93099 445 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 LHX4Q969G2 390 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 RAB39BQ96DA2 213 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 PRRX2Q99811 253 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 ICAM5Q9UMF0 924 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 CEP290O15078 2479 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 GSTZ1O43708 216 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-215ENST00000622697 CSF2RBP32927 897 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 KLF9Q13886 244 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-215ENST00000622697 IL34Q6ZMJ4 242 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 LSRQ86X29 649 aaPredicted RBP14.36□□□□□ -0.11
GABRB3-215ENST00000622697 PPP1R3EQ9H7J1 279 aa14.36□□□□□ -0.11
GABRB3-215ENST00000622697 RAB19A4D1S5 217 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF727A8MUV8 499 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 RNASEK-C17orf49H0YIS7 233 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 SFT2D2O95562 160 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 FUT3P21217 361 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 LINC00052Q96N35 136 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 TGIF2Q9GZN2 237 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 PTP4A3O75365 173 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 MIDNQ504T8 468 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 LRP5LA4QPB2 252 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 IGF2P01344 180 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 ZNF787Q6DD87 383 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 CHST6Q9GZX3 395 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 MRPS18AQ9NVS2 196 aaKnown RBP14.35□□□□□ -0.11
GABRB3-215ENST00000622697 STRAPQ9Y3F4 350 aaKnown RBP14.35□□□□□ -0.11
GABRB3-215ENST00000622697 CABIN1Q9Y6J0 2220 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 TO15178 435 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 GPR12P47775 334 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 DEGS2Q6QHC5 323 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 C1orf87Q8N0U7 546 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 OR5M9Q8NGP3 310 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 SLC22A20A6NK97 555 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 SULT1A3P0DMM9 295 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 SULT1A4P0DMN0 295 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 ZADH2Q8N4Q0 377 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 OR4D10Q8NGI6 311 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 TVP23CQ96ET8 276 aa14.35□□□□□ -0.11
GABRB3-215ENST00000622697 RBBP6Q7Z6E9 1792 aaKnown RBP14.34□□□□□ -0.11
GABRB3-215ENST00000622697 CCDC88CQ9P219 2028 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 CYB5BO43169 146 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 BAGE3Q86Y29 109 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 BAGE2Q86Y30 109 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 SLC38A6Q8IZM9 456 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 ANGPTL6Q8NI99 470 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 OCIAD1Q9NX40 245 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 ANKRD34CP0C6C1 535 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 RAB35Q15286 201 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 CLRN3Q8NCR9 226 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 CA10Q9NS85 328 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 P4HTMQ9NXG6 502 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 CTDSPLO15194 276 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 LIMS1P48059 325 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 OR1C1Q15619 314 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 TSPO2Q5TGU0 170 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 OR2T2Q6IF00 324 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 ASB13Q8WXK3 278 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 MTCH1Q9NZJ7 389 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 MYOFQ9NZM1 2061 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 PABPC1L2AQ5JQF8 200 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 TSEN54Q7Z6J9 526 aaKnown RBP14.34□□□□□ -0.11
GABRB3-215ENST00000622697 OR8U1Q8NH10 309 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 ASB5Q8WWX0 329 aa14.34□□□□□ -0.11
GABRB3-215ENST00000622697 C5orf67F2Z3F1 127 aa14.33□□□□□ -0.11
GABRB3-215ENST00000622697 M0R1B8 84 aa14.33□□□□□ -0.11
GABRB3-215ENST00000622697 C9orf40Q8IXQ3 194 aa14.33□□□□□ -0.11
GABRB3-215ENST00000622697 NANPQ8TBE9 248 aa14.33□□□□□ -0.11
GABRB3-215ENST00000622697 SPSB1Q96BD6 273 aa14.33□□□□□ -0.11
GABRB3-215ENST00000622697 RIMS4Q9H426 269 aaPredicted RBP14.33□□□□□ -0.11
GABRB3-215ENST00000622697 PCOLCE2Q9UKZ9 415 aa14.33□□□□□ -0.11
GABRB3-215ENST00000622697 HOXD11P31277 338 aaPredicted RBP14.33□□□□□ -0.12
GABRB3-215ENST00000622697 ZNF485Q8NCK3 441 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 OR10P1Q8NGE3 313 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 OR10D3Q8NH80 312 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 RGPD4Q7Z3J3 1758 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 PNLIPP16233 465 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 ZXDAP98168 799 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 DRAM2Q6UX65 266 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 CTSBP07858 339 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 OR1J1Q8NGS3 322 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 FZR1Q9UM11 496 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 H7BYZ3 331 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 SOX15O60248 233 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 GCNT2Q8N0V5 402 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 RASL10BQ96S79 203 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 C12orf10Q9HB07 376 aa14.33□□□□□ -0.12
GABRB3-215ENST00000622697 LIN7CQ9NUP9 197 aaKnown RBP14.33□□□□□ -0.12
GABRB3-215ENST00000622697 RP1P56715 2156 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms