RNA–Protein interactions for RNA: ENST00000617445.4

CCDC28A-203, Transcript of coiled-coil domain containing 28A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC28A, Length 1,240 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-203ENST00000617445 FIP1L1Q6UN15 594 aaKnown RBP15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 SLC35F2Q8IXU6 374 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DYRK2Q92630 601 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 GAFA1Q96PS6 74 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DPAGT1Q9H3H5 408 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 ADGRL4Q9HBW9 690 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 DUX4Q9UBX2 424 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 PIGLQ9Y2B2 252 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 FAM96BQ9Y3D0 163 aa15.7■□□□□ 0.1
CCDC28A-203ENST00000617445 PRR32B1ATL7 298 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 LOC110117498-PIK3R3F6TDL0 507 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 M0R1W7 72 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 MITFO75030 526 aaPredicted RBP15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 NRASP01111 189 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 TTRP02766 147 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 EEF1B2P24534 225 aaKnown RBP15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 CEP78Q5JTW2 689 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 ZNF684Q5T5D7 378 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 PLCXD3Q63HM9 321 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 MOB3CQ70IA8 216 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 ELMOD2Q8IZ81 293 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 FGFRL1Q8N441 504 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 AQP3Q92482 292 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 H1FXQ92522 213 aaKnown RBP15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 OSBPL10Q9BXB5 764 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 CHIAQ9BZP6 476 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 WARS2Q9UGM6 360 aaKnown RBP15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 SNX5Q9Y5X3 404 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 R4GMQ9 66 aa15.69■□□□□ 0.1
CCDC28A-203ENST00000617445 DLGAP1O14490 977 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 SRSF10O75494 262 aaKnown RBP15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 RHBDL1O75783 438 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 FAHP16930 419 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 MDKP21741 143 aaPredicted RBP15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 EPHA2P29317 976 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 IER3P46695 156 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 GABRA2P47869 451 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 RAG2P55895 527 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 BLMHQ13867 455 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 DGUOKQ16854 277 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 CLVS2Q5SYC1 327 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 BCL2L15Q5TBC7 163 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 NCR3LG1Q68D85 454 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 ZNF573Q86YE8 665 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 IL4I1Q96RQ9 567 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 APOL4Q9BPW4 351 aa15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.68■□□□□ 0.1
CCDC28A-203ENST00000617445 TRBV23-1A0A0A0MS06 115 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 A0A0U1RQK1 487 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 KNG1P01042 644 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 FBP1P09467 338 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 PSG2P11465 335 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 NDUFB7P17568 137 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 MFGE8Q08431 387 aaPredicted RBP15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 TMED1Q13445 227 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 SMIM21Q3B7S5 101 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 TMEM42Q69YG0 159 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 HAGHLQ6PII5 290 aaPredicted RBP15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 Q6ZSR3 168 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 BCDIN3DQ7Z5W3 292 aaKnown RBP15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 AMIGO2Q86SJ2 522 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 PIP4P2Q8N4L2 257 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 Q8N7P7 452 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 LRTOMTQ8WZ04 291 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 SDSLQ96GA7 329 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 CENPNQ96H22 339 aaPredicted RBP15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 METTL8Q9H825 291 aaKnown RBP15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 TNFRSF19Q9NS68 423 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 C1RLQ9NZP8 487 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 OR52A1Q9UKL2 312 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 GTF2A1LQ9UNN4 478 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 POLDIP2Q9Y2S7 368 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 V9GYS6 101 aa15.67■□□□□ 0.1
CCDC28A-203ENST00000617445 IGKV1D-17A0A075B6S4 117 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 A0A1W2PQ09 198 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 NOS1APO75052 506 aaPredicted RBP15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 KRT8P05787 483 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 OR2T7P0C7T2 308 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 SELLP14151 372 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 OMGP23515 440 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 HTR1FP30939 366 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 GDPGP1Q6ZNW5 385 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 POC1AQ8NBT0 407 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 OR2T27Q8NH04 317 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 PPP1R14AQ96A00 147 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 CIB1Q99828 191 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 TTTY10Q9BZA0 68 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 SIRT7Q9NRC8 400 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 MRM2Q9UI43 246 aaKnown RBP15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 ZNF222Q9UK12 451 aa15.66■□□□□ 0.1
CCDC28A-203ENST00000617445 CLPSL1A2RUU4 121 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 BTBD17A6NE02 478 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 RNASEK-C17orf49H0YIS7 233 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 J3QT63 122 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 NPFFO15130 113 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 CIB2O75838 187 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 SULT1C4O75897 302 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 UBE2E1P51965 193 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 ACSM1Q08AH1 577 aa15.65■□□□□ 0.1
CCDC28A-203ENST00000617445 OLFML2AQ68BL7 652 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms