RNA–Protein interactions for RNA: ENST00000616315.1

NEAT1-205, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 483 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-205ENST00000616315 CDC20Q12834 499 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 GPR176Q14439 515 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 MAD2L1BPQ15013 274 aaPredicted RBP2.59□□□□□ -1.99
NEAT1-205ENST00000616315 SYCP1Q15431 976 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 CCDC122Q5T0U0 273 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 FAHD1Q6P587 224 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 SETD3Q86TU7 594 aaPredicted RBP2.59□□□□□ -1.99
NEAT1-205ENST00000616315 TCAIMQ8N3R3 496 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 OR5T1Q8NG75 326 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 NT5CQ8TCD5 201 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 DOK4Q8TEW6 326 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 ESR2Q92731 530 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 C8orf76Q96K31 380 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 C18orf15Q96N68 181 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 ALS2CR12Q96Q35 445 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 DOK1Q99704 481 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 WDR55Q9H6Y2 383 aaPredicted RBP2.59□□□□□ -1.99
NEAT1-205ENST00000616315 PLEKHF2Q9H8W4 249 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 NECAP2Q9NVZ3 263 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 SDHAF2Q9NX18 166 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 TFR2Q9UP52 801 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 SLC7A11Q9UPY5 501 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 ACOT9Q9Y305 439 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 PPIL1Q9Y3C6 166 aa2.59□□□□□ -1.99
NEAT1-205ENST00000616315 V9GYY5 206 aaPredicted RBP2.59□□□□□ -1.99
NEAT1-205ENST00000616315 COL4A4P53420 1690 aaPredicted RBP2.58□□□□□ -2
NEAT1-205ENST00000616315 IGKV2-28A0A075B6P5 120 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 IGHV6-1A0A0B4J1U7 121 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 CCL15-CCL14A0A0B4J2E2 113 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 C7orf66A4D0T2 115 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 CENPBD1B2RD01 187 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 POLR3GO15318 223 aaPredicted RBP2.58□□□□□ -2
NEAT1-205ENST00000616315 RNF113AO15541 343 aaKnown RBP2.58□□□□□ -2
NEAT1-205ENST00000616315 CCDC22O60826 627 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 ZMPSTE24O75844 475 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 IGKV2D-28P01615 120 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 IGLV2-8P01709 118 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 PAX6P26367 422 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 P2RY2P41231 377 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 RANBP1P43487 201 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 DNASE1L1P49184 302 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 PSMB2P49721 201 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 OR12D2P58182 307 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 PITPNAQ00169 270 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 LAMTOR4Q0VGL1 99 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 TRDNQ13061 729 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 EIF4EBP1Q13541 118 aaPredicted RBP2.58□□□□□ -2
NEAT1-205ENST00000616315 TNXAQ16473 311 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 CCL15Q16663 113 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 COX19Q49B96 90 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 HHATQ5VTY9 493 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 KRT222Q8N1A0 295 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 OR4M2Q8NGB6 313 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 OR13G1Q8NGZ3 307 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 S100PBPQ96BU1 408 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 ADTRPQ96IZ2 230 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 OR10C1Q96KK4 312 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 SPIN2AQ99865 258 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 SPIN2BQ9BPZ2 258 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 PDCD1LG2Q9BQ51 273 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 FRMD8P1Q9BZ68 369 aaPredicted RBP2.58□□□□□ -2
NEAT1-205ENST00000616315 RMND1Q9NWS8 449 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 C21orf62Q9NYP8 219 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 CHMP5Q9NZZ3 219 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 FARSAQ9Y285 508 aaKnown RBP2.58□□□□□ -2
NEAT1-205ENST00000616315 ORC6Q9Y5N6 252 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 WIF1Q9Y5W5 379 aa2.58□□□□□ -2
NEAT1-205ENST00000616315 ZNF608Q9ULD9 1512 aaPredicted RBP2.58□□□□□ -2
NEAT1-205ENST00000616315 F8VZ95 297 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 MPZL1O95297 269 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 PRKACBP22694 351 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 C2orf80Q0P641 193 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 ADIGQ0VDE8 80 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 ZNF816Q0VGE8 651 aaPredicted RBP2.57□□□□□ -2
NEAT1-205ENST00000616315 DMC1Q14565 340 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 TOMM34Q15785 309 aaPredicted RBP2.57□□□□□ -2
NEAT1-205ENST00000616315 PSG3Q16557 428 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 PRSS8Q16651 343 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 TTC32Q5I0X7 151 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 ACTL10Q5JWF8 245 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 IDNKQ5T6J7 187 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 SYT6Q5T7P8 510 aaPredicted RBP2.57□□□□□ -2
NEAT1-205ENST00000616315 ZNF880Q6PDB4 577 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 SHISA6Q6ZSJ9 500 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 ZCCHC24Q8N2G6 241 aaKnown RBP2.57□□□□□ -2
NEAT1-205ENST00000616315 NECAP1Q8NC96 275 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.57□□□□□ -27e-11■□□□□ 9.3
NEAT1-205ENST00000616315 CPNE4Q96A23 557 aaPredicted RBP2.57□□□□□ -2
NEAT1-205ENST00000616315 MRPL48Q96GC5 212 aaKnown RBP2.57□□□□□ -2
NEAT1-205ENST00000616315 CPB2Q96IY4 423 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 CIB1Q99828 191 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 COPS4Q9BT78 406 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 TMED9Q9BVK6 235 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 BEX2Q9BXY8 128 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 ACOT13Q9NPJ3 140 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 FBXO6Q9NRD1 293 aaPredicted RBP2.57□□□□□ -2
NEAT1-205ENST00000616315 DDIT4Q9NX09 232 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 UBAP1Q9NZ09 502 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 CBY1Q9Y3M2 126 aa2.57□□□□□ -2
NEAT1-205ENST00000616315 A0A1B0GW15 77 aa2.56□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms