RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 CFHR4Q92496 578 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 PPP1R14AQ96A00 147 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 NIPSNAP1Q9BPW8 284 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 MROQ9BYG7 248 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 YIPF3Q9GZM5 350 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 NPFFR1Q9GZQ6 430 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 PPP1R3EQ9H7J1 279 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 MED20Q9H944 212 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 ZNF556Q9HAH1 456 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 LAMP5Q9UJQ1 280 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 ZNF222Q9UK12 451 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 ZNF281Q9Y2X9 895 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 TMEM14AQ9Y6G1 99 aa14.53□□□□□ -0.08
SHKBP1-227ENST00000602011 IGKV1D-17A0A075B6S4 117 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 A0A1W2PRD5 423 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 A0A1W2PRF3 423 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 A0A1W2PRM7 423 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 B2RBV5 119 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 ZNF732B4DXR9 585 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 MTRF1O75570 445 aaKnown RBP14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 PRB2P02812 416 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 SELLP14151 372 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 GPM6AP51674 278 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 LGALS4P56470 323 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 GMFBP60983 142 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 PRB3Q04118 309 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 EMX1Q04741 257 aaPredicted RBP14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 KLRD1Q13241 179 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 GINS1Q14691 196 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 SMIM21Q3B7S5 101 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 PLBD1Q6P4A8 553 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 ZNF561Q8N587 486 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 ZNRF1Q8ND25 227 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 TMEM185AQ8NFB2 350 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 OR8B12Q8NGG6 310 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 CLPTM1LQ96KA5 538 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 LYZL4Q96KX0 146 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 LRGUKQ96M69 825 aa14.52□□□□□ -0.09
SHKBP1-227ENST00000602011 TMEM269A0A1B0GVZ9 245 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 SLC1A7O00341 560 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 ANGPTL7O43827 346 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 NOS1APO75052 506 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 E2F6O75461 281 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 CST1P01037 141 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 GNGT1P63211 74 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 KPRPQ5T749 579 aaPredicted RBP14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 ZNF573Q86YE8 665 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 ASB17Q8WXJ9 295 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 AQP3Q92482 292 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 NSL1Q96IY1 281 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 CHID1Q9BWS9 393 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 ENPP5Q9UJA9 477 aa14.51□□□□□ -0.09
SHKBP1-227ENST00000602011 VGLL3A8MV65 326 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 H3BUI4 141 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 GNGT2O14610 69 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 OSMP13725 252 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 ANXA8P13928 327 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 CAPZA1P52907 286 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 GYS2P54840 703 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 ACTR3P61158 418 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 RPL31P62899 125 aaKnown RBP14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 CDK5Q00535 292 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 HCP5Q6MZN7 132 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 CPOQ8IVL8 374 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 FAM185AQ8N0U4 392 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 IQCF1Q8N6M8 205 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 ASB9Q96DX5 294 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 VNN3Q9NY84 501 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 USE1Q9NZ43 259 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 POLDIP2Q9Y2S7 368 aa14.5□□□□□ -0.09
SHKBP1-227ENST00000602011 G3V4G9 280 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 XPNPEP2O43895 674 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 SELENOFO60613 162 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 RHBDL1O75783 438 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 PRDX2P32119 198 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 ERVFRD-1P60508 538 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 ROM1Q03395 351 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 ZNF829Q3KNS6 432 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 HAGHLQ6PII5 290 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 CRIP3Q6Q6R5 217 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 ACP7Q6ZNF0 438 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 MOB3CQ70IA8 216 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 ZNF679Q8IYX0 411 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 PNKDQ8N490 385 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 POC1AQ8NBT0 407 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 PPP1R35Q8TAP8 253 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 FGF23Q9GZV9 251 aaPredicted RBP14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 YY1AP1Q9H869 796 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 PITPNC1Q9UKF7 332 aa14.49□□□□□ -0.09
SHKBP1-227ENST00000602011 RFPL4AA6NLU0 287 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 RFPL4AL1F8VTS6 287 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 NRASP01111 189 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 IGLV3-1P01715 115 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 FAHP16930 419 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 DLX1P56177 255 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 RPS7P62081 194 aaKnown RBP14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 MS4A2Q01362 244 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 BEAN1Q3B7T3 259 aa14.48□□□□□ -0.09
SHKBP1-227ENST00000602011 ZNF684Q5T5D7 378 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms