RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ZNF649Q9BS31 505 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 MRI1Q9BV20 369 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 TMPRSS13Q9BYE2 586 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 FGF23Q9GZV9 251 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 VCX3BQ9H321 246 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 METTL17Q9H7H0 456 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 CHCHD3Q9NX63 227 aaKnown RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 DNAJB11Q9UBS4 358 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 HHLA2Q9UM44 414 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 POLDIP2Q9Y2S7 368 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 CAB39Q9Y376 341 aaPredicted RBP8.43□□□□□ -1.06
TPM4-207ENST00000588032 INSIG2Q9Y5U4 225 aa8.43□□□□□ -1.06
TPM4-207ENST00000588032 MALRD1Q5VYJ5 2156 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 LOC105371242A0A075B767 164 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 KIR2DS1A0A191URI9 304 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 LOC107986453A0A1B0GWG9 222 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 PQLC2LA1A4F0 135 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 EFCAB10A6NFE3 127 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 TMEM212A6NML5 194 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 H0YHG0 523 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 TMPRSS2O15393 492 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 GYPAP02724 150 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 CCDC159P0C7I6 412 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 PPIAL4GP0DN37 164 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 PIPP12273 146 aaPredicted RBP8.42□□□□□ -1.06
TPM4-207ENST00000588032 EGR1P18146 543 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 MYL12AP19105 171 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 GLRA1P23415 457 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 TGM4P49221 684 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 FUT6P51993 359 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 NANOS3P60323 173 aaKnown RBP8.42□□□□□ -1.06
TPM4-207ENST00000588032 PAX8Q06710 450 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 CCDC58Q4VC31 144 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 HAGHLQ6PII5 290 aaPredicted RBP8.42□□□□□ -1.06
TPM4-207ENST00000588032 IL17RELQ6ZVW7 336 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 C1QL2Q7Z5L3 287 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 RDH10Q8IZV5 341 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 ZNF676Q8N7Q3 588 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 DNAAF1Q8NEP3 725 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 FBLIM1Q8WUP2 373 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 AQP3Q92482 292 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 TFAP2CQ92754 450 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 TMIGD2Q96BF3 282 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 TMEM80Q96HE8 168 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 MED30Q96HR3 178 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 DMRTB1Q96MA1 342 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 CHST5Q9GZS9 411 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 COMMD4Q9H0A8 199 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 ISG20L2Q9H9L3 353 aaKnown RBP8.42□□□□□ -1.06
TPM4-207ENST00000588032 NEK6Q9HC98 313 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 MMP26Q9NRE1 261 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 GPR173Q9NS66 373 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 PLCXD1Q9NUJ7 323 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 CNOT2Q9NZN8 540 aaKnown RBP8.42□□□□□ -1.06
TPM4-207ENST00000588032 NKX1-2Q9UD57 310 aaPredicted RBP8.42□□□□□ -1.06
TPM4-207ENST00000588032 DIMT1Q9UNQ2 313 aaKnown RBP8.42□□□□□ -1.06
TPM4-207ENST00000588032 EXOSC1Q9Y3B2 195 aaKnown RBP8.42□□□□□ -1.06
TPM4-207ENST00000588032 AUP1Q9Y679 476 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.42□□□□□ -1.069e-8■■■□□ 16.9
TPM4-207ENST00000588032 C2CD3Q4AC94 2353 aa8.42□□□□□ -1.06
TPM4-207ENST00000588032 IGHV2-70DA0A0C4DH43 119 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 A6NIN4 97 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 OR4C45A6NMZ5 311 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.41□□□□□ -1.06
TPM4-207ENST00000588032 J3QT63 122 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 AKR7A2O43488 359 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 ENSAO43768 121 aaKnown RBP8.41□□□□□ -1.06
TPM4-207ENST00000588032 NOS1APO75052 506 aaPredicted RBP8.41□□□□□ -1.06
TPM4-207ENST00000588032 AVPP01185 164 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 LIMS3P0CW19 117 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 LIMS4P0CW20 117 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 ZNF20P17024 532 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 PRKACBP22694 351 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 MPZP25189 248 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 HAAOP46952 286 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 PAX2Q02962 417 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 CNN3Q15417 329 aaKnown RBP8.41□□□□□ -1.06
TPM4-207ENST00000588032 UBE2V2Q15819 145 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 C1orf229Q6ZS94 237 aaPredicted RBP8.41□□□□□ -1.06
TPM4-207ENST00000588032 UTS2BQ765I0 119 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 PNLDC1Q8NA58 520 aaKnown RBP8.41□□□□□ -1.06
TPM4-207ENST00000588032 DACT3Q96B18 629 aaPredicted RBP8.41□□□□□ -1.06
TPM4-207ENST00000588032 NUDT16L1Q9BRJ7 211 aaKnown RBP8.41□□□□□ -1.06
TPM4-207ENST00000588032 PKIBQ9C010 78 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 NLKQ9UBE8 527 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 CTSZQ9UBR2 303 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 OPN4Q9UHM6 478 aa8.41□□□□□ -1.06
TPM4-207ENST00000588032 TLN2Q9Y4G6 2542 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 IGHV3OR15-7A0A075B7D8 119 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 A0A0A6YYJ9 748 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 TRBV2A0A0J9YWF9 115 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 FAM230AA0A1W2PPH8 454 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 NKX6-3A6NJ46 265 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 OR2AT4A6NND4 320 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 DVL1O14640 695 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 NDUFB3O43676 98 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 RHBDL1O75783 438 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 ALX3O95076 343 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 GNAO1P09471 354 aa8.4□□□□□ -1.06
TPM4-207ENST00000588032 ATF1P18846 271 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms