RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 FJX1Q86VR8 437 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 C9orf106Q8NAJ2 232 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 LILRB1Q8NHL6 650 aaPredicted RBP8.15□□□□□ -1.11
LINC00838-201ENST00000562956 GIMAP1Q8WWP7 306 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 SARAFQ96BY9 339 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 POM121L2Q96KW2 1035 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 CHIAQ9BZP6 476 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 HEXA-AS1Q9H8Q6 139 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 GLRX2Q9NS18 164 aa8.15□□□□□ -1.11
LINC00838-201ENST00000562956 URB1O60287 2271 aaKnown RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 FAM230AA0A1W2PPH8 454 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 ARPC1BO15143 372 aaKnown RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 NRASP01111 189 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 UBBP0CG47 229 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 AKAIN1P0CW23 69 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 ALDH3B1P43353 468 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 ARHGDIBP52566 201 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 RAG2P55895 527 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 PLAC9Q5JTB6 97 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 Q6ZS92 163 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 GABRG1Q8N1C3 465 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 RBMXL3Q8N7X1 1067 aaKnown RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 NUDCD2Q8WVJ2 157 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 GPR137Q96N19 417 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 UBQLN2Q9UHD9 624 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 KCNK7Q9Y2U2 307 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 PEX14O75381 377 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 NGFP01138 241 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 MELTFP08582 738 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 SERPINA2P20848 420 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 FAUP35544 74 aaKnown RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 ZP1P60852 638 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 GK2Q14410 553 aaPredicted RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 HLXQ14774 488 aaPredicted RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 LGALSLQ3ZCW2 172 aaPredicted RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 STEAP1BQ6NZ63 245 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 ZNF782Q6ZMW2 699 aaPredicted RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 C17orf107Q6ZR85 190 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 TRAPPC6BQ86SZ2 158 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 CNEP1R1Q8N9A8 125 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 OR4S1Q8NGB4 309 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 OR51S1Q8NGJ8 323 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 SPSB1Q96BD6 273 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 NUDT16L1Q9BRJ7 211 aaKnown RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 ACTR6Q9GZN1 396 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 OR51J1Q9H342 316 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 LUZP4Q9P127 313 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 DMXL2Q8TDJ6 3036 aa8.14□□□□□ -1.11
LINC00838-201ENST00000562956 TNRC6AQ8NDV7 1962 aaKnown RBP8.14□□□□□ -1.11
LINC00838-201ENST00000562956 M0QYG6 137 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 SCGNO76038 276 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 NDUFB6O95139 128 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 TPOP07202 933 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 CHRM2P08172 466 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 MGMTP16455 207 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 IGHV1-2P23083 117 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 KIR2DL2P43627 348 aaPredicted RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 TMEM50BP56557 158 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 RPS27AP62979 156 aaKnown RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 PLP2Q04941 152 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 ST3GAL2Q16842 350 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 ACSF3Q4G176 576 aaPredicted RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 MDP1Q86V88 176 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 PIAS4Q8N2W9 510 aaPredicted RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 GVQW1Q8N7I0 195 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 TMEM229BQ8NBD8 167 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 RAB3CQ96E17 227 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 RADILQ96JH8 1075 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 REPIN1Q9BWE0 567 aaKnown RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 CST11Q9H112 138 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 ELL3Q9HB65 397 aaPredicted RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 GHRLQ9UBU3 117 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 A0A1W2PR80 420 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 SPRY1O43609 319 aaPredicted RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 ANGPTL7O43827 346 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 SSX5O60225 188 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 GFRA3O60609 400 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 RAD51DO75771 328 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 LYZL6O75951 148 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 CYB5AP00167 134 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 IFNA7P01567 189 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 HPXP02790 462 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 TMEM225BP0DP42 221 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 NUP62P37198 522 aaPredicted RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 TAS2R19P59542 299 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 FOXF2Q12947 444 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 CNN3Q15417 329 aaKnown RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 IGSF11Q5DX21 431 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 SHEQ5VZ18 495 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 ZNF585AQ6P3V2 769 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 VWA1Q6PCB0 445 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 OR51T1Q8NGJ9 327 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 PIGCQ92535 297 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 WNT2BQ93097 391 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 CXorf58Q96LI9 332 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 ZNF75AQ96N20 296 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 TINAGL1Q9GZM7 467 aaPredicted RBP8.13□□□□□ -1.11
LINC00838-201ENST00000562956 POFUT1Q9H488 388 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 CRIM1Q9NZV1 1036 aa8.13□□□□□ -1.11
LINC00838-201ENST00000562956 DKK4Q9UBT3 224 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms