RNA–Protein interactions for RNA: ENST00000556413.1

SCFD1-219, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-219ENST00000556413 UPK1AO00322 258 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ACOX3O15254 700 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 SMIM24O75264 130 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CDH16O75309 829 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF324O75467 553 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 GPX5O75715 221 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 OXSR1O95747 527 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 TGFAP01135 160 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 RPS17P08708 135 aaKnown RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 IGFBP1P08833 259 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ABHD2P08910 425 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 RHOXF2BP0C7M4 288 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CSNK2A2P19784 350 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 DRD5P21918 477 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 USF1P22415 310 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 PEX19P40855 299 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 MAGEA4P43358 317 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 PPICP45877 212 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 SERPINB8P50452 374 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ATP6V0D1P61421 351 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 GNG11P61952 73 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 RPL38P63173 70 aaKnown RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 MRPS22P82650 360 aaKnown RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 VLDLRP98155 873 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 DEFA6Q01524 100 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 GLO1Q04760 184 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 C2orf80Q0P641 193 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ZP4Q12836 540 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 PPP1R8Q12972 351 aaKnown RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 MAD2L1BPQ15013 274 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 PLPPR5Q32ZL2 321 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 BEND6Q5SZJ8 279 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 AVPI1Q5T686 147 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 C1QTNF12Q5T7M4 302 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 GPR157Q5UAW9 335 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 MEDAGQ5VYS4 303 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CYB5R2Q6BCY4 276 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CLEC6AQ6EIG7 209 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 OR2A2Q6IF42 318 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 C11orf71Q6IPW1 123 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 LEG1Q6P5S2 330 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CASP12Q6UXS9 341 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 C4orf22Q6V702 233 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 DNM1P46Q6ZS02 220 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 C3orf62Q6ZUJ4 267 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 LRRC8AQ8IWT6 810 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF100Q8IYN0 542 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 GABRG1Q8N1C3 465 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CENPSQ8N2Z9 138 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 MUC15Q8N387 334 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF786Q8N393 782 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 SVOPLQ8N434 492 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ARFGAP2Q8N6H7 521 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 LRRC17Q8N6Y2 441 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CCNYL1Q8N7R7 359 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 COX18Q8N8Q8 333 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 OR7G1Q8NGA0 311 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 STAG3L4Q8TBR4 150 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ACTRT1Q8TDG2 376 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 C10orf105Q8TEF2 133 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 UBE2E3Q969T4 207 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 PPP1R36Q96LQ0 422 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 TSSK3Q96PN8 268 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 SERPINI1Q99574 410 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 COQ7Q99807 217 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 SLC6A7Q99884 636 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 PELOQ9BRX2 385 aaKnown RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 NDUFAF3Q9BU61 184 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 C1orf50Q9BV19 199 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 POTEKPQ9BYX7 375 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 NMRAL1Q9HBL8 299 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 POPDC3Q9HBV1 291 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 MS4A12Q9NXJ0 267 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 TREM2Q9NZC2 230 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 MCTS1Q9ULC4 181 aaKnown RBP1.94□□□□□ -2.1
SCFD1-219ENST00000556413 PPIAL4AQ9Y536 164 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 ZNF780BQ9Y6R6 833 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 NBEAL1Q6ZS30 2694 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 MPDZO75970 2070 aa1.94□□□□□ -2.1
SCFD1-219ENST00000556413 CHD3Q12873 2000 aaKnown RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 MEGF8Q7Z7M0 2845 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 MDFIC2A0A1B0GVS7 189 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CIB4A0PJX0 185 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 TMEM72A0PK05 275 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 TM9SF1O15321 606 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 TCF21O43680 179 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 SUPT7LO94864 414 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 SEMA3DO95025 777 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 KCNK2O95069 426 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 KLHL2O95198 593 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 C6orf47O95873 294 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 LGI1O95970 557 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ANXA4P09525 319 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 UBTFL6P0CB48 400 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-219ENST00000556413 GGT1P19440 569 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 ME2P23368 584 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 OMGP23515 440 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 CRABP2P29373 138 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 HMOX2P30519 316 aa1.93□□□□□ -2.1
SCFD1-219ENST00000556413 SERPINB1P30740 379 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms