RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 OR4M1Q8NGD0 313 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 CANT1Q8WVQ1 401 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 AQP3Q92482 292 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 CCDC124Q96CT7 223 aaKnown RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 MED30Q96HR3 178 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 NSL1Q96IY1 281 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 RGCCQ9H4X1 137 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 METTL8Q9H825 291 aaKnown RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 FAM206AQ9NX38 181 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 FBLN5Q9UBX5 448 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 COPS3Q9UNS2 423 aa9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 CAB39Q9Y376 341 aaPredicted RBP9.39□□□□□ -0.91
PRPF40B-212ENST00000551111 MEX3AA1L020 520 aaKnown RBP9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 BTBD17A6NE02 478 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 CCDC182A6NF36 153 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 A6NIN4 97 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 RFPL4AA6NLU0 287 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 RFPL4AL1F8VTS6 287 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 H0YAE9 185 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 DCTN3O75935 186 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 CST1P01037 141 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 IGLV3-1P01715 115 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 MRPL3P09001 348 aaKnown RBP9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 CSF1P09603 554 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 RAP2AP10114 183 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 CCL3L1P16619 93 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 FAHP16930 419 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 GABRA5P31644 462 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 BMXP51813 675 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 MFGE8Q08431 387 aaPredicted RBP9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 ACSM1Q08AH1 577 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 APOFQ13790 326 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 BEAN1Q3B7T3 259 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 CEACAM21Q3KPI0 293 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 LDLRAD2Q5SZI1 272 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 HAGHLQ6PII5 290 aaPredicted RBP9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 MOB3CQ70IA8 216 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 KRT74Q7RTS7 529 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 BCDIN3DQ7Z5W3 292 aaKnown RBP9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 LHFPL4Q7Z7J7 247 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 ZNF454Q8N9F8 522 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 OR51E1Q8TCB6 317 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 TEAD3Q99594 435 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 MEGF9Q9H1U4 602 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 NDE1Q9NXR1 346 aa9.38□□□□□ -0.91
PRPF40B-212ENST00000551111 M0R129 80 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 MTRF1O75570 445 aaKnown RBP9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 OSMP13725 252 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 JUNBP17275 347 aaPredicted RBP9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 PAICSP22234 425 aaKnown RBP9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 MAP2K3P46734 347 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 RAB13P51153 203 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 GNG3P63215 75 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 C2orf68Q2NKX9 166 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 NCR3LG1Q68D85 454 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 TMEM200BQ69YZ2 307 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 CCBE1Q6UXH8 406 aaPredicted RBP9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 ACP7Q6ZNF0 438 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 PLEKHG7Q6ZR37 379 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 KRT77Q7Z794 578 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 KLHDC1Q8N7A1 406 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 OR5R1Q8NH85 324 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 FAM81AQ8TBF8 368 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 CFHR4Q92496 578 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 SDSLQ96GA7 329 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 PBOV1Q9GZY1 135 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 NIPAL2Q9H841 368 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 GPR84Q9NQS5 396 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 LAMP5Q9UJQ1 280 aa9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 SF3B6Q9Y3B4 125 aaKnown RBP9.37□□□□□ -0.91
PRPF40B-212ENST00000551111 A0A0U1RQV5 110 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 TMEM269A0A1B0GVZ9 245 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 ARRDC5A6NEK1 342 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 PRODHO43272 600 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 SRSF10O75494 262 aaKnown RBP9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 TTRP02766 147 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 COX7A1P24310 79 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 KIR2DS4P43632 304 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 CAPZA1P52907 286 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 RPS7P62081 194 aaKnown RBP9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 ZNF273Q14593 569 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 HERPUD1Q15011 391 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 LRRC75BQ2VPJ9 315 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 PLA1AQ53H76 456 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 ZNF782Q6ZMW2 699 aaPredicted RBP9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 Q6ZS46 218 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 THAP5Q7Z6K1 395 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 FTMTQ8N4E7 242 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 OR5A2Q8NGI9 324 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 OR51G2Q8NGK0 314 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 HIST1H2AAQ96QV6 131 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 APOL4Q9BPW4 351 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 MUC13Q9H3R2 512 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 ABCB9Q9NP78 766 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 GPR173Q9NS66 373 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 TVP23BQ9NYZ1 205 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 PIGLQ9Y2B2 252 aa9.36□□□□□ -0.91
PRPF40B-212ENST00000551111 A0A1B0GTI1 187 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 F8VVB4 439 aa9.35□□□□□ -0.91
PRPF40B-212ENST00000551111 F8VWA3 439 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms