RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 PI3P19957 117 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 CPT2P23786 658 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 SNU13P55769 128 aaKnown RBP14.17□□□□□ -0.14
COL4A1-204ENST00000543140 ZMYND11Q15326 602 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 OR5H2Q8NGV7 314 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 TERB2Q8NHR7 220 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 PIGCQ92535 297 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 SPSB1Q96BD6 273 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 BORCS8Q96FH0 119 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 MICU1Q9BPX6 476 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 CSAG2Q9Y5P2 127 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 hCG_38984A0A1B0GV85 526 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 ZNF503-AS2A6NEH8 195 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 RGS11O94810 467 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 CSTBP04080 98 aaKnown RBP14.17□□□□□ -0.14
COL4A1-204ENST00000543140 CD46P15529 392 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 AP2S1P53680 142 aaPredicted RBP14.17□□□□□ -0.14
COL4A1-204ENST00000543140 ARG2P78540 354 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 BAMBIQ13145 260 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 SLC10A1Q14973 349 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 CNN3Q15417 329 aaKnown RBP14.17□□□□□ -0.14
COL4A1-204ENST00000543140 TAF9Q16594 264 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 CLVS2Q5SYC1 327 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 KCTD9Q7L273 389 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 HOGA1Q86XE5 327 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 CSNK2A3Q8NEV1 391 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 HDHD3Q9BSH5 251 aaPredicted RBP14.17□□□□□ -0.14
COL4A1-204ENST00000543140 TM2D1Q9BX74 207 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 LDAHQ9H6V9 325 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 ZNF701Q9NV72 531 aaPredicted RBP14.17□□□□□ -0.14
COL4A1-204ENST00000543140 PLEKHJ1Q9NW61 149 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 ANAPC10Q9UM13 185 aa14.17□□□□□ -0.14
COL4A1-204ENST00000543140 FAM25EA8MYX2 175 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 EFSO43281 561 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 OR3A3P47888 321 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 OR3A2P47893 321 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 RBP2P50120 134 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 LRRC37A5PQ49AS3 106 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 RNFT1Q5M7Z0 435 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 ARHGAP21Q5T5U3 1957 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 APH1AQ96BI3 265 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 PDCD10Q9BUL8 212 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 METTL9Q9H1A3 318 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 KCNN3Q9UGI6 736 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 PRKACBP22694 351 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 MOB3CQ70IA8 216 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 NUFIP2Q7Z417 695 aaKnown RBP14.16□□□□□ -0.14
COL4A1-204ENST00000543140 OR5M8Q8NGP6 311 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 Q96M66 194 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 LINC00470Q9BZP3 86 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 C12orf49Q9H741 205 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 UBQLN2Q9UHD9 624 aa14.16□□□□□ -0.14
COL4A1-204ENST00000543140 NKX2-8O15522 239 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 SERPINA5P05154 406 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 FTH1P19P0C7X4 201 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 CD79AP11912 226 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 VAX1Q5SQQ9 334 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 PLCXD3Q63HM9 321 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 BRICD5Q6PL45 260 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 TMUB2Q71RG4 321 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 PIP4P1Q86T03 277 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 MCEMP1Q8IX19 187 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 ZNF100Q8IYN0 542 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 BATF2Q8N1L9 274 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 FAM109AQ8N4B1 249 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 FAAP24Q9BTP7 215 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 ARL6Q9H0F7 186 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 ZNF318Q5VUA4 2279 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 IGKV1D-8A0A087WSZ0 117 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 TRAV14DV4A0A0A6YYC5 116 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 C5orf49A4QMS7 147 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 HMSDA8MTL9 139 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 S100A11P31949 105 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 GMFBP60983 142 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 ZNF766Q5HY98 468 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 SIGIRRQ6IA17 410 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 ZFP62Q8NB50 900 aaPredicted RBP14.15□□□□□ -0.14
COL4A1-204ENST00000543140 RGCCQ9H4X1 137 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 EHFQ9NZC4 300 aa14.15□□□□□ -0.14
COL4A1-204ENST00000543140 IGKV1-12A0A0C4DH73 117 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 OR5H14A6NHG9 310 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 SERPINE3A8MV23 424 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 IL2RAP01589 272 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 IGKV1D-12P01611 117 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 C4BPBP20851 252 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 CBX5P45973 191 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 PMP22Q01453 160 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 GK2Q14410 553 aaPredicted RBP14.14□□□□□ -0.15
COL4A1-204ENST00000543140 HLXQ14774 488 aaPredicted RBP14.14□□□□□ -0.15
COL4A1-204ENST00000543140 TMEM42Q69YG0 159 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 ARRDC1Q8N5I2 433 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 OR13G1Q8NGZ3 307 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 MITD1Q8WV92 249 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 PHB2Q99623 299 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 C1QTNF5Q9BXJ0 243 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 C5orf66Q9H5L9 145 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 BCO1Q9HAY6 547 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.14□□□□□ -0.15
COL4A1-204ENST00000543140 MAB21L2Q9Y586 359 aa14.14□□□□□ -0.15
COL4A1-204ENST00000543140 CAMK2BQ13554 666 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms