RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 SPHARQ15513 63 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 MED22Q15528 200 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 CHRFAM7AQ494W8 412 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 TMEM155Q4W5P6 130 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 YIF1BQ5BJH7 314 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 DMKNQ6E0U4 476 aaPredicted RBP11.37□□□□□ -0.59
RPAIN-205ENST00000536255 XAF1Q6GPH4 301 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 UTS2BQ765I0 119 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 WDR86Q86TI4 376 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 SERPINA12Q8IW75 414 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 OR51A4Q8NGJ6 313 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 OR10Z1Q8NGY1 313 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF671Q8TAW3 534 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 FGGYQ96C11 551 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF665Q9H7R5 613 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 DCAF16Q9NXF7 216 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 UBAP1Q9NZ09 502 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 PCDHB10Q9UN67 800 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 PPIAL4AQ9Y536 164 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 TANC2Q9HCD6 1990 aa11.37□□□□□ -0.59
RPAIN-205ENST00000536255 ABCA2Q9BZC7 2435 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 FAM157AC9JC47 383 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 CDIPTO14735 213 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 PLPP2O43688 288 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 LALBAP00709 142 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 MT-ND2P03891 347 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 CD1AP06126 327 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 CELP19835 753 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 PRKACBP22694 351 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 CPT2P23786 658 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 FUT6P51993 359 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 WDR82Q6UXN9 313 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 LRRC28Q86X40 367 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-205ENST00000536255 PRIMA1Q86XR5 153 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 SCCPDHQ8NBX0 429 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 OR5D14Q8NGL3 314 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 OR10AC1Q8NH08 325 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 LRRC29Q8WV35 223 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 SGCDQ92629 289 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 THRSPQ92748 146 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 GHSRQ92847 366 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 ADAT3Q96EY9 351 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-205ENST00000536255 BORCS8Q96FH0 119 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 BEX2Q9BXY8 128 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 SHARPINQ9H0F6 387 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 OR51I2Q9H344 312 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 LPAR3Q9UBY5 353 aa11.36□□□□□ -0.59
RPAIN-205ENST00000536255 SIRT4Q9Y6E7 314 aaPredicted RBP11.36□□□□□ -0.59
RPAIN-205ENST00000536255 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.36□□□□□ -0.591e-8■■■□□ 16.6
RPAIN-205ENST00000536255 JMJD1CQ15652 2540 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 TRAV38-1A0A0B4J264 116 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 PQLC2LA1A4F0 135 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 IGHV2-5P01817 119 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 MSMBP08118 114 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 ATF1P18846 271 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 HAAOP46952 286 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 DVL1P1P54792 670 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-205ENST00000536255 GPR50Q13585 617 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 ZMYND11Q15326 602 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 TBCEQ15813 527 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-205ENST00000536255 UBE2V2Q15819 145 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 FAM120AOSQ5T036 256 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF826PQ6ZT77 177 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 GLCCI1Q86VQ1 547 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 C11orf53Q8IXP5 236 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 SVOPQ8N4V2 548 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 PARP16Q8N5Y8 322 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 ZFP41Q8N8Y5 198 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 DNAAF1Q8NEP3 725 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 TRMT10AQ8TBZ6 339 aaKnown RBP11.35□□□□□ -0.59
RPAIN-205ENST00000536255 RPL3LQ92901 407 aaKnown RBP11.35□□□□□ -0.59
RPAIN-205ENST00000536255 SPSB1Q96BD6 273 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 OR5M11Q96RB7 305 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 FGF23Q9GZV9 251 aaPredicted RBP11.35□□□□□ -0.59
RPAIN-205ENST00000536255 ZCCHC4Q9H5U6 513 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 POLDIP2Q9Y2S7 368 aa11.35□□□□□ -0.59
RPAIN-205ENST00000536255 LSM2Q9Y333 95 aaKnown RBP11.35□□□□□ -0.59
RPAIN-205ENST00000536255 PNMA8CA0A1B0GUJ8 204 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 FAM230AA0A1W2PPH8 454 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 OOEPA6NGQ2 149 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 J3QT63 122 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 LGALS8O00214 317 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 NDUFA2O43678 99 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 ALX3O95076 343 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 LHBP01229 141 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 MUC1P15941 1255 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-205ENST00000536255 HNF1AP20823 631 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 RBMXP38159 391 aaKnown RBP11.34□□□□□ -0.59
RPAIN-205ENST00000536255 SOX2P48431 317 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 RBP2P50120 134 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 ATP1B3P54709 279 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 MICBQ29980 383 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 CR1LQ2VPA4 569 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 ZNF404Q494X3 552 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 Q499Y3 187 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 DMRTC1Q5HYR2 192 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 HAGHLQ6PII5 290 aaPredicted RBP11.34□□□□□ -0.59
RPAIN-205ENST00000536255 LHFPL2Q6ZUX7 228 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 MS4A15Q8N5U1 240 aa11.34□□□□□ -0.59
RPAIN-205ENST00000536255 GCSAMQ8N6F7 178 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms