RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 ZNF879B4DU55 563 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 K7EN84 100 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 ZMPSTE24O75844 475 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 PTTG1O95997 202 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 RHOCP08134 193 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 OR5AL1P0C617 328 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 GOLGA8HP0CJ92 632 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 ME2P23368 584 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 APLNRP35414 380 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 GALR1P47211 349 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 FLI1Q01543 452 aaPredicted RBP2.33□□□□□ -2.04
PRKDC-205ENST00000535375 DYNC1I2Q13409 638 aaKnown RBP2.33□□□□□ -2.04
PRKDC-205ENST00000535375 NAB1Q13506 487 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 SLC25A35Q3KQZ1 300 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 Q3ZCU0 254 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 TEX30Q5JUR7 227 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 SPIN3Q5JUX0 258 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 FAM27D1Q5T7N8 215 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 MFSD14CQ5VZR4 134 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 OPN5Q6U736 354 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 SETD3Q86TU7 594 aaPredicted RBP2.33□□□□□ -2.04
PRKDC-205ENST00000535375 TMEM256Q8N2U0 113 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 ZNF645Q8N7E2 425 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 TTLQ8NG68 377 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 LGALS14Q8TCE9 139 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 DCAKDQ8WVC6 231 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 CDS1Q92903 461 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 ZBED3Q96IU2 234 aaPredicted RBP2.33□□□□□ -2.04
PRKDC-205ENST00000535375 CPB2Q96IY4 423 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 CFAP53Q96M91 514 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 C20orf144Q9BQM9 153 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 RHOXF2Q9BQY4 288 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 ZNF302Q9NR11 478 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 AGPAT3Q9NRZ7 376 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 RHBDL2Q9NX52 303 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 STK38LQ9Y2H1 464 aa2.33□□□□□ -2.04
PRKDC-205ENST00000535375 COL5A1P20908 1838 aaPredicted RBP2.33□□□□□ -2.04
PRKDC-205ENST00000535375 IGHV6-1A0A0B4J1U7 121 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 TRAV8-4A0A0B4J246 113 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 CENPVL3A0A0U1RRI6 287 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 SEC14L6B5MCN3 397 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 H7C2Y5 167 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 M0R1B8 84 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 MANBAO00462 879 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 EIF1BO60739 113 aaKnown RBP2.32□□□□□ -2.04
PRKDC-205ENST00000535375 P01737 135 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 CCNOP22674 350 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 PAX6P26367 422 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 TGFBR1P36897 503 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 EIF1P41567 113 aaKnown RBP2.32□□□□□ -2.04
PRKDC-205ENST00000535375 ERFP50548 548 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 MAD2L1BPQ15013 274 aaPredicted RBP2.32□□□□□ -2.04
PRKDC-205ENST00000535375 PSG3Q16557 428 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 GUSBP11Q6P575 273 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 MDP1Q86V88 176 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 CA13Q8N1Q1 262 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 ZCCHC24Q8N2G6 241 aaKnown RBP2.32□□□□□ -2.04
PRKDC-205ENST00000535375 SPANXA2-OT1Q8N9U9 137 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 S100PBPQ96BU1 408 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 GLT1D1Q96MS3 346 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 NAPGQ99747 312 aaPredicted RBP2.32□□□□□ -2.04
PRKDC-205ENST00000535375 CHCHD7Q9BUK0 85 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 FRMD8P1Q9BZ68 369 aaPredicted RBP2.32□□□□□ -2.04
PRKDC-205ENST00000535375 RMND1Q9NWS8 449 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 NDRG2Q9UN36 371 aaKnown RBP2.32□□□□□ -2.04
PRKDC-205ENST00000535375 CFL2Q9Y281 166 aa2.32□□□□□ -2.04
PRKDC-205ENST00000535375 CARHSP1Q9Y2V2 147 aaKnown RBP2.32□□□□□ -2.04
PRKDC-205ENST00000535375 TRAV8-7A0A075B6U6 113 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 TVP23AA6NH52 213 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 J3QT63 122 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 M0R1X1 148 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 ZNF593O00488 134 aaPredicted RBP2.31□□□□□ -2.04
PRKDC-205ENST00000535375 NEMFO60524 1076 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 PLIN3O60664 434 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 CCDC22O60826 627 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 SC5DO75845 299 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 HLA-DQB1P01920 261 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 APOA1P02647 267 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 MMP7P09237 267 aaPredicted RBP2.31□□□□□ -2.04
PRKDC-205ENST00000535375 LCN1P31025 176 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 KCNJ3P48549 501 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 MTPNP58546 118 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 IFFO1Q0D2I5 559 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 TOMM34Q15785 309 aaPredicted RBP2.31□□□□□ -2.04
PRKDC-205ENST00000535375 TNXAQ16473 311 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 FAHD1Q6P587 224 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 FAM19A1Q7Z5A9 133 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 RBM45Q8IUH3 476 aaKnown RBP2.31□□□□□ -2.04
PRKDC-205ENST00000535375 TMEM105Q8N8V8 129 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 ST20-AS1Q8NBB2 130 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 OR1P1Q8NH06 330 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 OR1S1Q8NH92 325 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 LRRC20Q8TCA0 184 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 UTP23Q9BRU9 249 aaKnown RBP2.31□□□□□ -2.04
PRKDC-205ENST00000535375 HINT2Q9BX68 163 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 DDIT4Q9NX09 232 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 VAPAQ9P0L0 249 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 PPIL1Q9Y3C6 166 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 LRRC42Q9Y546 428 aa2.31□□□□□ -2.04
PRKDC-205ENST00000535375 TMEM94Q12767 1356 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms